Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm23243-201ENSMUST00000180047 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm24659-201ENSMUST00000180212 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm24169-201ENSMUST00000180244 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm23689-201ENSMUST00000180354 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm27359-201ENSMUST00000184153 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm27785-201ENSMUST00000184268 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm27466-201ENSMUST00000184396 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm27703-201ENSMUST00000184836 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NpcdF8VQB8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NpcdF8VQB8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NpcdF8VQB8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NpcdF8VQB8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NpcdF8VQB8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NpcdF8VQB8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
NpcdF8VQB8 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NpcdF8VQB8 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NpcdF8VQB8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NpcdF8VQB8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NpcdF8VQB8 AC159621.2-201ENSMUST00000223519 1326 ntBASIC18.84■□□□□ 0.61
NpcdF8VQB8 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NpcdF8VQB8 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.84■□□□□ 0.61
NpcdF8VQB8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NpcdF8VQB8 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
NpcdF8VQB8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC18.84■□□□□ 0.61
NpcdF8VQB8 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NpcdF8VQB8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.84■□□□□ 0.61
NpcdF8VQB8 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NpcdF8VQB8 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.84■□□□□ 0.61
NpcdF8VQB8 Gm10253-201ENSMUST00000194270 940 ntBASIC18.84■□□□□ 0.61
NpcdF8VQB8 Gm7774-201ENSMUST00000200064 533 ntBASIC18.84■□□□□ 0.61
NpcdF8VQB8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC18.84■□□□□ 0.61
NpcdF8VQB8 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.84■□□□□ 0.61
NpcdF8VQB8 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NpcdF8VQB8 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.84■□□□□ 0.61
NpcdF8VQB8 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NpcdF8VQB8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NpcdF8VQB8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NpcdF8VQB8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NpcdF8VQB8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NpcdF8VQB8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
NpcdF8VQB8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NpcdF8VQB8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.83■□□□□ 0.61
NpcdF8VQB8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NpcdF8VQB8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
NpcdF8VQB8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NpcdF8VQB8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NpcdF8VQB8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
NpcdF8VQB8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
NpcdF8VQB8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
NpcdF8VQB8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NpcdF8VQB8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NpcdF8VQB8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NpcdF8VQB8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NpcdF8VQB8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.83■□□□□ 0.6
NpcdF8VQB8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.83■□□□□ 0.6
NpcdF8VQB8 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
NpcdF8VQB8 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC18.83■□□□□ 0.6
NpcdF8VQB8 Gm20553-201ENSMUST00000204205 844 ntBASIC18.83■□□□□ 0.6
NpcdF8VQB8 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NpcdF8VQB8 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
NpcdF8VQB8 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NpcdF8VQB8 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.83■□□□□ 0.6
NpcdF8VQB8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
NpcdF8VQB8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NpcdF8VQB8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NpcdF8VQB8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NpcdF8VQB8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NpcdF8VQB8 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NpcdF8VQB8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NpcdF8VQB8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NpcdF8VQB8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NpcdF8VQB8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
NpcdF8VQB8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
NpcdF8VQB8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NpcdF8VQB8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NpcdF8VQB8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
NpcdF8VQB8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NpcdF8VQB8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NpcdF8VQB8 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.82■□□□□ 0.6
NpcdF8VQB8 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NpcdF8VQB8 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC18.82■□□□□ 0.6
NpcdF8VQB8 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC18.82■□□□□ 0.6
NpcdF8VQB8 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
NpcdF8VQB8 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NpcdF8VQB8 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NpcdF8VQB8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.82■□□□□ 0.6
NpcdF8VQB8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NpcdF8VQB8 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NpcdF8VQB8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NpcdF8VQB8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NpcdF8VQB8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NpcdF8VQB8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NpcdF8VQB8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NpcdF8VQB8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NpcdF8VQB8 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.81■□□□□ 0.6
NpcdF8VQB8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NpcdF8VQB8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms