Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Pcdhb9E9Q5G2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhb9E9Q5G2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhb9E9Q5G2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhb9E9Q5G2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb9E9Q5G2 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb9E9Q5G2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb9E9Q5G2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhb9E9Q5G2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.44■□□□□ 0.54
Pcdhb9E9Q5G2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhb9E9Q5G2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhb9E9Q5G2 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.44■□□□□ 0.54
Pcdhb9E9Q5G2 Gm37153-201ENSMUST00000193637 231 ntBASIC18.44■□□□□ 0.54
Pcdhb9E9Q5G2 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.44■□□□□ 0.54
Pcdhb9E9Q5G2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.44■□□□□ 0.54
Pcdhb9E9Q5G2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Pcdhb9E9Q5G2 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb9E9Q5G2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb9E9Q5G2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb9E9Q5G2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb9E9Q5G2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb9E9Q5G2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb9E9Q5G2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhb9E9Q5G2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdhb9E9Q5G2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb9E9Q5G2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb9E9Q5G2 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb9E9Q5G2 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.42■□□□□ 0.54
Pcdhb9E9Q5G2 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Pcdhb9E9Q5G2 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdhb9E9Q5G2 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhb9E9Q5G2 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.42■□□□□ 0.54
Pcdhb9E9Q5G2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb9E9Q5G2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb9E9Q5G2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb9E9Q5G2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb9E9Q5G2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb9E9Q5G2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb9E9Q5G2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb9E9Q5G2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb9E9Q5G2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhb9E9Q5G2 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhb9E9Q5G2 Gm14722-201ENSMUST00000118943 689 ntBASIC18.41■□□□□ 0.54
Pcdhb9E9Q5G2 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb9E9Q5G2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.41■□□□□ 0.54
Pcdhb9E9Q5G2 Gm27525-201ENSMUST00000184465 107 ntBASIC18.41■□□□□ 0.54
Pcdhb9E9Q5G2 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.41■□□□□ 0.54
Pcdhb9E9Q5G2 Gm45167-201ENSMUST00000208007 322 ntBASIC18.41■□□□□ 0.54
Pcdhb9E9Q5G2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb9E9Q5G2 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb9E9Q5G2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb9E9Q5G2 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb9E9Q5G2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb9E9Q5G2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb9E9Q5G2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb9E9Q5G2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.4■□□□□ 0.54
Pcdhb9E9Q5G2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb9E9Q5G2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb9E9Q5G2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb9E9Q5G2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb9E9Q5G2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms