Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Gm44357-201ENSMUST00000195897 142 ntBASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Gm19658-201ENSMUST00000196231 138 ntBASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Gm44367-201ENSMUST00000196836 138 ntBASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Gm44350-201ENSMUST00000197197 138 ntBASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Gm44390-201ENSMUST00000197533 144 ntBASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Gm44313-201ENSMUST00000198018 138 ntBASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Gm44486-201ENSMUST00000198508 138 ntBASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Gm44314-201ENSMUST00000199263 138 ntBASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Gm44394-201ENSMUST00000199558 138 ntBASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Gm44484-201ENSMUST00000199873 138 ntBASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Gm44466-201ENSMUST00000200264 138 ntBASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Gm44359-201ENSMUST00000200671 138 ntBASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Gm7153-201ENSMUST00000117092 455 ntBASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4lE9Q2N0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4lE9Q2N0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cpsf4lE9Q2N0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Cpsf4lE9Q2N0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.27□□□□□ -0.28
Cpsf4lE9Q2N0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cpsf4lE9Q2N0 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms