Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.04□□□□□ -0.16
Sptbn4E9PX29 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sptbn4E9PX29 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.04□□□□□ -0.16
Sptbn4E9PX29 Gm19164-201ENSMUST00000210667 640 ntBASIC14.04□□□□□ -0.16
Sptbn4E9PX29 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.04□□□□□ -0.16
Sptbn4E9PX29 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sptbn4E9PX29 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sptbn4E9PX29 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sptbn4E9PX29 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sptbn4E9PX29 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sptbn4E9PX29 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sptbn4E9PX29 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sptbn4E9PX29 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sptbn4E9PX29 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sptbn4E9PX29 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sptbn4E9PX29 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sptbn4E9PX29 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.03□□□□□ -0.16
Sptbn4E9PX29 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sptbn4E9PX29 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sptbn4E9PX29 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.03□□□□□ -0.16
Sptbn4E9PX29 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sptbn4E9PX29 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.03□□□□□ -0.16
Sptbn4E9PX29 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sptbn4E9PX29 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.03□□□□□ -0.16
Sptbn4E9PX29 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sptbn4E9PX29 Gm43703-201ENSMUST00000200523 763 ntBASIC14.03□□□□□ -0.16
Sptbn4E9PX29 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.03□□□□□ -0.16
Sptbn4E9PX29 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sptbn4E9PX29 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sptbn4E9PX29 Asic1-205ENSMUST00000228185 1818 ntBASIC14.03□□□□□ -0.16
Sptbn4E9PX29 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sptbn4E9PX29 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sptbn4E9PX29 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sptbn4E9PX29 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sptbn4E9PX29 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sptbn4E9PX29 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sptbn4E9PX29 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sptbn4E9PX29 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sptbn4E9PX29 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sptbn4E9PX29 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sptbn4E9PX29 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.02□□□□□ -0.16
Sptbn4E9PX29 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sptbn4E9PX29 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Sptbn4E9PX29 Gm12176-201ENSMUST00000121420 875 ntBASIC14.02□□□□□ -0.16
Sptbn4E9PX29 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Sptbn4E9PX29 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sptbn4E9PX29 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Sptbn4E9PX29 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sptbn4E9PX29 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sptbn4E9PX29 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sptbn4E9PX29 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.02□□□□□ -0.16
Sptbn4E9PX29 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sptbn4E9PX29 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sptbn4E9PX29 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sptbn4E9PX29 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sptbn4E9PX29 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sptbn4E9PX29 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.02□□□□□ -0.17
Sptbn4E9PX29 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sptbn4E9PX29 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.02□□□□□ -0.17
Sptbn4E9PX29 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sptbn4E9PX29 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Sptbn4E9PX29 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sptbn4E9PX29 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sptbn4E9PX29 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sptbn4E9PX29 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sptbn4E9PX29 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sptbn4E9PX29 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sptbn4E9PX29 Gm12742-201ENSMUST00000117326 410 ntBASIC14.01□□□□□ -0.17
Sptbn4E9PX29 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.01□□□□□ -0.17
Sptbn4E9PX29 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Sptbn4E9PX29 Gm8062-201ENSMUST00000139696 444 ntBASIC14.01□□□□□ -0.17
Sptbn4E9PX29 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sptbn4E9PX29 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sptbn4E9PX29 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sptbn4E9PX29 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sptbn4E9PX29 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.01□□□□□ -0.17
Sptbn4E9PX29 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sptbn4E9PX29 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sptbn4E9PX29 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sptbn4E9PX29 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sptbn4E9PX29 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.01□□□□□ -0.17
Sptbn4E9PX29 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sptbn4E9PX29 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.01□□□□□ -0.17
Sptbn4E9PX29 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sptbn4E9PX29 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sptbn4E9PX29 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sptbn4E9PX29 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sptbn4E9PX29 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.01□□□□□ -0.17
Sptbn4E9PX29 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sptbn4E9PX29 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sptbn4E9PX29 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sptbn4E9PX29 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sptbn4E9PX29 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sptbn4E9PX29 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sptbn4E9PX29 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sptbn4E9PX29 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14□□□□□ -0.17
Sptbn4E9PX29 CT009713.10-202ENSMUST00000225734 696 ntBASIC14□□□□□ -0.17
Sptbn4E9PX29 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sptbn4E9PX29 Gm10478-201ENSMUST00000084451 396 ntBASIC14□□□□□ -0.17
Sptbn4E9PX29 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms