Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm28043E0CXC2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm28043E0CXC2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Gm28043E0CXC2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm28043E0CXC2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm28043E0CXC2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Gm28043E0CXC2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm28043E0CXC2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Gm28043E0CXC2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm28043E0CXC2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.79■□□□□ 0.12
Gm28043E0CXC2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm28043E0CXC2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Gm28043E0CXC2 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.79■□□□□ 0.12
Gm28043E0CXC2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Gm28043E0CXC2 Gm5587-201ENSMUST00000206270 674 ntBASIC15.79■□□□□ 0.12
Gm28043E0CXC2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Gm28043E0CXC2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm28043E0CXC2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Gm28043E0CXC2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm28043E0CXC2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm28043E0CXC2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm28043E0CXC2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm28043E0CXC2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm28043E0CXC2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.79■□□□□ 0.12
Gm28043E0CXC2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm28043E0CXC2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.79■□□□□ 0.12
Gm28043E0CXC2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Gm28043E0CXC2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
Gm28043E0CXC2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gm28043E0CXC2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Gm28043E0CXC2 Asic1-205ENSMUST00000228185 1818 ntBASIC15.78■□□□□ 0.12
Gm28043E0CXC2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gm28043E0CXC2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Gm28043E0CXC2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Gm28043E0CXC2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Gm28043E0CXC2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.78■□□□□ 0.12
Gm28043E0CXC2 Gm23634-201ENSMUST00000175071 91 ntBASIC15.78■□□□□ 0.12
Gm28043E0CXC2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Gm28043E0CXC2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Gm28043E0CXC2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gm28043E0CXC2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Gm28043E0CXC2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gm28043E0CXC2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.78■□□□□ 0.12
Gm28043E0CXC2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gm28043E0CXC2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Gm28043E0CXC2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gm28043E0CXC2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Gm28043E0CXC2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Gm28043E0CXC2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm28043E0CXC2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm28043E0CXC2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.77■□□□□ 0.12
Gm28043E0CXC2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm28043E0CXC2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Gm28043E0CXC2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm28043E0CXC2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Gm28043E0CXC2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm28043E0CXC2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Gm28043E0CXC2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Gm28043E0CXC2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm28043E0CXC2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm28043E0CXC2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Gm28043E0CXC2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.77■□□□□ 0.12
Gm28043E0CXC2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Gm28043E0CXC2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.77■□□□□ 0.12
Gm28043E0CXC2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.77■□□□□ 0.12
Gm28043E0CXC2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.77■□□□□ 0.12
Gm28043E0CXC2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm28043E0CXC2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm28043E0CXC2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm28043E0CXC2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Gm28043E0CXC2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gm28043E0CXC2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gm28043E0CXC2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gm28043E0CXC2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gm28043E0CXC2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gm28043E0CXC2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gm28043E0CXC2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.77■□□□□ 0.11
Gm28043E0CXC2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Gm28043E0CXC2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Gm28043E0CXC2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gm28043E0CXC2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gm28043E0CXC2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Gm28043E0CXC2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Gm28043E0CXC2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gm28043E0CXC2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gm28043E0CXC2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gm28043E0CXC2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Gm28043E0CXC2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Gm28043E0CXC2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Gm28043E0CXC2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Gm28043E0CXC2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.76■□□□□ 0.11
Gm28043E0CXC2 Gm25016-201ENSMUST00000158399 131 ntBASIC15.76■□□□□ 0.11
Gm28043E0CXC2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.76■□□□□ 0.11
Gm28043E0CXC2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Gm28043E0CXC2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gm28043E0CXC2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gm28043E0CXC2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.76■□□□□ 0.11
Gm28043E0CXC2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gm28043E0CXC2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Gm28043E0CXC2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms