Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Shank1D3YZU1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shank1D3YZU1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shank1D3YZU1 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shank1D3YZU1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shank1D3YZU1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shank1D3YZU1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Shank1D3YZU1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shank1D3YZU1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Shank1D3YZU1 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shank1D3YZU1 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shank1D3YZU1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Gm27622-201ENSMUST00000183779 60 ntBASIC14.03□□□□□ -0.16
Shank1D3YZU1 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.03□□□□□ -0.16
Shank1D3YZU1 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.03□□□□□ -0.16
Shank1D3YZU1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shank1D3YZU1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Mir449b-201ENSMUST00000104833 80 ntBASIC14.03□□□□□ -0.16
Shank1D3YZU1 Gm15358-201ENSMUST00000119249 520 ntBASIC14.03□□□□□ -0.16
Shank1D3YZU1 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Gm27301-201ENSMUST00000184012 127 ntBASIC14.03□□□□□ -0.16
Shank1D3YZU1 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Shank1D3YZU1 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.02□□□□□ -0.16
Shank1D3YZU1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shank1D3YZU1 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shank1D3YZU1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shank1D3YZU1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shank1D3YZU1 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.02□□□□□ -0.16
Shank1D3YZU1 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Shank1D3YZU1 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Shank1D3YZU1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Shank1D3YZU1 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.02□□□□□ -0.16
Shank1D3YZU1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.02□□□□□ -0.16
Shank1D3YZU1 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shank1D3YZU1 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.02□□□□□ -0.16
Shank1D3YZU1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shank1D3YZU1 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shank1D3YZU1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shank1D3YZU1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shank1D3YZU1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shank1D3YZU1 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shank1D3YZU1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Shank1D3YZU1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Shank1D3YZU1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shank1D3YZU1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shank1D3YZU1 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shank1D3YZU1 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.02□□□□□ -0.17
Shank1D3YZU1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shank1D3YZU1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shank1D3YZU1 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Shank1D3YZU1 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shank1D3YZU1 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.02□□□□□ -0.17
Shank1D3YZU1 Gm5745-201ENSMUST00000183748 313 ntBASIC14.02□□□□□ -0.17
Shank1D3YZU1 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shank1D3YZU1 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.02□□□□□ -0.17
Shank1D3YZU1 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Shank1D3YZU1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Shank1D3YZU1 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shank1D3YZU1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Shank1D3YZU1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shank1D3YZU1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shank1D3YZU1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shank1D3YZU1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shank1D3YZU1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shank1D3YZU1 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shank1D3YZU1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Shank1D3YZU1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Shank1D3YZU1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Shank1D3YZU1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shank1D3YZU1 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shank1D3YZU1 Rprl2-201ENSMUST00000157150 290 ntBASIC14.01□□□□□ -0.17
Shank1D3YZU1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms