Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm12887B1AVM1 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm12887B1AVM1 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm12887B1AVM1 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm12887B1AVM1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm12887B1AVM1 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm12887B1AVM1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.75□□□□□ -0.37
Gm12887B1AVM1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.75□□□□□ -0.37
Gm12887B1AVM1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm12887B1AVM1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Gm12887B1AVM1 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Gm12887B1AVM1 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm12887B1AVM1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.75□□□□□ -0.37
Gm12887B1AVM1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm12887B1AVM1 Gm20049-201ENSMUST00000219950 730 ntBASIC12.75□□□□□ -0.37
Gm12887B1AVM1 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm12887B1AVM1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm12887B1AVM1 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm12887B1AVM1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.75□□□□□ -0.37
Gm12887B1AVM1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm12887B1AVM1 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm12887B1AVM1 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm12887B1AVM1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm12887B1AVM1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm12887B1AVM1 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Gm15378-201ENSMUST00000121894 207 ntBASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Gm10602-201ENSMUST00000098239 609 ntBASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm12887B1AVM1 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm12887B1AVM1 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms