Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4bA6X942 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4bA6X942 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4bA6X942 Gm15920-201ENSMUST00000118998 402 ntBASIC16.81■□□□□ 0.28
Sh2d4bA6X942 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.81■□□□□ 0.28
Sh2d4bA6X942 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.81■□□□□ 0.28
Sh2d4bA6X942 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.81■□□□□ 0.28
Sh2d4bA6X942 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.81■□□□□ 0.28
Sh2d4bA6X942 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.81■□□□□ 0.28
Sh2d4bA6X942 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sh2d4bA6X942 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4bA6X942 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sh2d4bA6X942 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4bA6X942 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4bA6X942 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4bA6X942 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Sh2d4bA6X942 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4bA6X942 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4bA6X942 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Gm12497-201ENSMUST00000138778 237 ntBASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Gm27628-201ENSMUST00000184911 107 ntBASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4bA6X942 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.79■□□□□ 0.28
Sh2d4bA6X942 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4bA6X942 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Gm7222-201ENSMUST00000117512 906 ntBASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms