Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a5A6H584 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a5A6H584 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a5A6H584 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a5A6H584 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a5A6H584 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.78□□□□□ -0.52
Col6a5A6H584 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Col6a5A6H584 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.78□□□□□ -0.52
Col6a5A6H584 AC122024.2-201ENSMUST00000220086 871 ntBASIC11.78□□□□□ -0.52
Col6a5A6H584 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a5A6H584 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a5A6H584 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a5A6H584 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Col6a5A6H584 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a5A6H584 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a5A6H584 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Col6a5A6H584 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
Col6a5A6H584 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.78□□□□□ -0.52
Col6a5A6H584 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a5A6H584 Gm13226-201ENSMUST00000117838 404 ntBASIC11.77□□□□□ -0.52
Col6a5A6H584 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.77□□□□□ -0.52
Col6a5A6H584 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a5A6H584 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a5A6H584 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.77□□□□□ -0.52
Col6a5A6H584 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a5A6H584 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a5A6H584 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a5A6H584 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a5A6H584 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a5A6H584 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a5A6H584 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a5A6H584 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Col6a5A6H584 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a5A6H584 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a5A6H584 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a5A6H584 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a5A6H584 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a5A6H584 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Col6a5A6H584 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Col6a5A6H584 Gm12742-201ENSMUST00000117326 410 ntBASIC11.77□□□□□ -0.53
Col6a5A6H584 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Col6a5A6H584 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a5A6H584 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a5A6H584 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.77□□□□□ -0.53
Col6a5A6H584 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a5A6H584 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Col6a5A6H584 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a5A6H584 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a5A6H584 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a5A6H584 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a5A6H584 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a5A6H584 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a5A6H584 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a5A6H584 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Col6a5A6H584 Gm19164-201ENSMUST00000210667 640 ntBASIC11.76□□□□□ -0.53
Col6a5A6H584 Gm5035-201ENSMUST00000215581 927 ntBASIC11.76□□□□□ -0.53
Col6a5A6H584 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.76□□□□□ -0.53
Col6a5A6H584 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a5A6H584 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a5A6H584 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a5A6H584 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a5A6H584 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a5A6H584 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a5A6H584 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a5A6H584 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a5A6H584 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a5A6H584 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a5A6H584 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a5A6H584 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
Col6a5A6H584 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.76□□□□□ -0.53
Col6a5A6H584 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.76□□□□□ -0.53
Col6a5A6H584 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a5A6H584 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Col6a5A6H584 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a5A6H584 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a5A6H584 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a5A6H584 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a5A6H584 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Col6a5A6H584 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a5A6H584 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a5A6H584 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a5A6H584 Gm16499-203ENSMUST00000204633 2177 ntBASIC11.76□□□□□ -0.53
Col6a5A6H584 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.76□□□□□ -0.53
Col6a5A6H584 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a5A6H584 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.75□□□□□ -0.53
Col6a5A6H584 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.75□□□□□ -0.53
Col6a5A6H584 Gm38241-201ENSMUST00000192641 898 ntBASIC11.75□□□□□ -0.53
Col6a5A6H584 Gm38225-201ENSMUST00000194001 393 ntBASIC11.75□□□□□ -0.53
Col6a5A6H584 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a5A6H584 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a5A6H584 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a5A6H584 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a5A6H584 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a5A6H584 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a5A6H584 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a5A6H584 Gm4875-201ENSMUST00000118257 786 ntBASIC11.75□□□□□ -0.53
Col6a5A6H584 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Col6a5A6H584 Mir1982-201ENSMUST00000157368 74 ntBASIC11.75□□□□□ -0.53
Col6a5A6H584 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.75□□□□□ -0.53
Col6a5A6H584 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms