Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.41■□□□□ 0.38
Scn3aA2ASI5 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.41■□□□□ 0.38
Scn3aA2ASI5 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.41■□□□□ 0.38
Scn3aA2ASI5 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.41■□□□□ 0.38
Scn3aA2ASI5 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn3aA2ASI5 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Scn3aA2ASI5 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn3aA2ASI5 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Scn3aA2ASI5 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Scn3aA2ASI5 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.4■□□□□ 0.38
Scn3aA2ASI5 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn3aA2ASI5 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn3aA2ASI5 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn3aA2ASI5 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Scn3aA2ASI5 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn3aA2ASI5 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn3aA2ASI5 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn3aA2ASI5 Gm26308-201ENSMUST00000157768 69 ntBASIC17.4■□□□□ 0.38
Scn3aA2ASI5 Gm17271-201ENSMUST00000165535 355 ntBASIC17.4■□□□□ 0.38
Scn3aA2ASI5 Mir6990-201ENSMUST00000183724 91 ntBASIC17.4■□□□□ 0.38
Scn3aA2ASI5 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.4■□□□□ 0.38
Scn3aA2ASI5 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.4■□□□□ 0.38
Scn3aA2ASI5 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn3aA2ASI5 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn3aA2ASI5 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn3aA2ASI5 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn3aA2ASI5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scn3aA2ASI5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn3aA2ASI5 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Scn3aA2ASI5 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Scn3aA2ASI5 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.39■□□□□ 0.38
Scn3aA2ASI5 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Scn3aA2ASI5 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Scn3aA2ASI5 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn3aA2ASI5 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn3aA2ASI5 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Scn3aA2ASI5 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Scn3aA2ASI5 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.39■□□□□ 0.37
Scn3aA2ASI5 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scn3aA2ASI5 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Scn3aA2ASI5 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.39■□□□□ 0.37
Scn3aA2ASI5 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn3aA2ASI5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn3aA2ASI5 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn3aA2ASI5 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn3aA2ASI5 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn3aA2ASI5 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn3aA2ASI5 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn3aA2ASI5 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn3aA2ASI5 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scn3aA2ASI5 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.39■□□□□ 0.37
Scn3aA2ASI5 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Scn3aA2ASI5 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Scn3aA2ASI5 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.39■□□□□ 0.37
Scn3aA2ASI5 Gm10154-201ENSMUST00000084445 354 ntBASIC17.39■□□□□ 0.37
Scn3aA2ASI5 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Scn3aA2ASI5 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn3aA2ASI5 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn3aA2ASI5 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Scn3aA2ASI5 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn3aA2ASI5 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn3aA2ASI5 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scn3aA2ASI5 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Scn3aA2ASI5 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn3aA2ASI5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn3aA2ASI5 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn3aA2ASI5 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.38■□□□□ 0.37
Scn3aA2ASI5 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.38■□□□□ 0.37
Scn3aA2ASI5 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.38■□□□□ 0.37
Scn3aA2ASI5 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn3aA2ASI5 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.38■□□□□ 0.37
Scn3aA2ASI5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn3aA2ASI5 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Scn3aA2ASI5 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Scn3aA2ASI5 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn3aA2ASI5 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.37■□□□□ 0.37
Scn3aA2ASI5 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Scn3aA2ASI5 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.37■□□□□ 0.37
Scn3aA2ASI5 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Scn3aA2ASI5 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Scn3aA2ASI5 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.37■□□□□ 0.37
Scn3aA2ASI5 Gm20553-201ENSMUST00000204205 844 ntBASIC17.37■□□□□ 0.37
Scn3aA2ASI5 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.37■□□□□ 0.37
Scn3aA2ASI5 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.37■□□□□ 0.37
Scn3aA2ASI5 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn3aA2ASI5 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.37■□□□□ 0.37
Scn3aA2ASI5 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.37■□□□□ 0.37
Scn3aA2ASI5 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.37■□□□□ 0.37
Scn3aA2ASI5 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn3aA2ASI5 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn3aA2ASI5 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn3aA2ASI5 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn3aA2ASI5 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn3aA2ASI5 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn3aA2ASI5 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Scn3aA2ASI5 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Scn3aA2ASI5 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scn3aA2ASI5 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.37■□□□□ 0.37
Scn3aA2ASI5 Mir1895-201ENSMUST00000122615 79 ntBASIC17.37■□□□□ 0.37
Scn3aA2ASI5 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms