Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Scn1aA2APX8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Scn1aA2APX8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.39■□□□□ 0.21
Scn1aA2APX8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Scn1aA2APX8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn1aA2APX8 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scn1aA2APX8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn1aA2APX8 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.39■□□□□ 0.21
Scn1aA2APX8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.39■□□□□ 0.21
Scn1aA2APX8 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Scn1aA2APX8 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.39■□□□□ 0.21
Scn1aA2APX8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn1aA2APX8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.39■□□□□ 0.21
Scn1aA2APX8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scn1aA2APX8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scn1aA2APX8 Prob1-201ENSMUST00000097619 3021 ntBASIC16.39■□□□□ 0.21
Scn1aA2APX8 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn1aA2APX8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn1aA2APX8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Scn1aA2APX8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn1aA2APX8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn1aA2APX8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn1aA2APX8 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scn1aA2APX8 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Scn1aA2APX8 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn1aA2APX8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn1aA2APX8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.38■□□□□ 0.21
Scn1aA2APX8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.38■□□□□ 0.21
Scn1aA2APX8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn1aA2APX8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn1aA2APX8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Scn1aA2APX8 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn1aA2APX8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Scn1aA2APX8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scn1aA2APX8 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.38■□□□□ 0.21
Scn1aA2APX8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn1aA2APX8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn1aA2APX8 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Scn1aA2APX8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn1aA2APX8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scn1aA2APX8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.38■□□□□ 0.21
Scn1aA2APX8 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn1aA2APX8 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn1aA2APX8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn1aA2APX8 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.37■□□□□ 0.21
Scn1aA2APX8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn1aA2APX8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn1aA2APX8 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn1aA2APX8 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn1aA2APX8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
Scn1aA2APX8 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.37■□□□□ 0.21
Scn1aA2APX8 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.37■□□□□ 0.21
Scn1aA2APX8 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn1aA2APX8 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.37■□□□□ 0.21
Scn1aA2APX8 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.37■□□□□ 0.21
Scn1aA2APX8 Gm11594-201ENSMUST00000122313 162 ntBASIC16.37■□□□□ 0.21
Scn1aA2APX8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn1aA2APX8 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn1aA2APX8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.37■□□□□ 0.21
Scn1aA2APX8 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn1aA2APX8 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.37■□□□□ 0.21
Scn1aA2APX8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Scn1aA2APX8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn1aA2APX8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn1aA2APX8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn1aA2APX8 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Scn1aA2APX8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn1aA2APX8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn1aA2APX8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn1aA2APX8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn1aA2APX8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn1aA2APX8 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn1aA2APX8 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn1aA2APX8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.36■□□□□ 0.21
Scn1aA2APX8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Scn1aA2APX8 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.36■□□□□ 0.21
Scn1aA2APX8 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn1aA2APX8 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn1aA2APX8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn1aA2APX8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.36■□□□□ 0.21
Scn1aA2APX8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn1aA2APX8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn1aA2APX8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Scn1aA2APX8 Dancr-204ENSMUST00000132389 2347 ntBASIC16.36■□□□□ 0.21
Scn1aA2APX8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.36■□□□□ 0.21
Scn1aA2APX8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn1aA2APX8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn1aA2APX8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn1aA2APX8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn1aA2APX8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn1aA2APX8 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.36■□□□□ 0.21
Scn1aA2APX8 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn1aA2APX8 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.36■□□□□ 0.21
Scn1aA2APX8 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.36■□□□□ 0.21
Scn1aA2APX8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn1aA2APX8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn1aA2APX8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms