Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC24.51■■□□□ 1.51
Shroom2A2ALU4 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC24.51■■□□□ 1.51
Shroom2A2ALU4 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC24.51■■□□□ 1.51
Shroom2A2ALU4 AC159006.1-201ENSMUST00000226396 258 ntBASIC24.51■■□□□ 1.51
Shroom2A2ALU4 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Shroom2A2ALU4 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Shroom2A2ALU4 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Shroom2A2ALU4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Shroom2A2ALU4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC24.51■■□□□ 1.51
Shroom2A2ALU4 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Shroom2A2ALU4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Shroom2A2ALU4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Shroom2A2ALU4 Gm13226-201ENSMUST00000117838 404 ntBASIC24.51■■□□□ 1.51
Shroom2A2ALU4 Gm5303-201ENSMUST00000117943 1252 ntBASIC24.51■■□□□ 1.51
Shroom2A2ALU4 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC24.51■■□□□ 1.51
Shroom2A2ALU4 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
Shroom2A2ALU4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Shroom2A2ALU4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Shroom2A2ALU4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Shroom2A2ALU4 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
Shroom2A2ALU4 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Shroom2A2ALU4 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Shroom2A2ALU4 Gm24543-201ENSMUST00000103867 82 ntBASIC24.5■■□□□ 1.51
Shroom2A2ALU4 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
Shroom2A2ALU4 Gm6257-201ENSMUST00000163864 910 ntBASIC24.5■■□□□ 1.51
Shroom2A2ALU4 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Shroom2A2ALU4 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC24.5■■□□□ 1.51
Shroom2A2ALU4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Shroom2A2ALU4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Shroom2A2ALU4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Shroom2A2ALU4 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Shroom2A2ALU4 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC24.49■■□□□ 1.51
Shroom2A2ALU4 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Shroom2A2ALU4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Shroom2A2ALU4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Shroom2A2ALU4 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Shroom2A2ALU4 AC159896.2-201ENSMUST00000214753 269 ntBASIC24.49■■□□□ 1.51
Shroom2A2ALU4 AC154319.1-201ENSMUST00000216330 312 ntBASIC24.49■■□□□ 1.51
Shroom2A2ALU4 AL589735.1-201ENSMUST00000224353 270 ntBASIC24.49■■□□□ 1.51
Shroom2A2ALU4 Iqck-206ENSMUST00000208658 2891 ntBASIC24.49■■□□□ 1.51
Shroom2A2ALU4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Shroom2A2ALU4 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Shroom2A2ALU4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Shroom2A2ALU4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
Shroom2A2ALU4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Shroom2A2ALU4 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Shroom2A2ALU4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC24.48■■□□□ 1.51
Shroom2A2ALU4 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
Shroom2A2ALU4 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Shroom2A2ALU4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC24.48■■□□□ 1.51
Shroom2A2ALU4 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC24.48■■□□□ 1.51
Shroom2A2ALU4 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC24.48■■□□□ 1.51
Shroom2A2ALU4 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Shroom2A2ALU4 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Shroom2A2ALU4 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC24.48■■□□□ 1.51
Shroom2A2ALU4 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC24.48■■□□□ 1.51
Shroom2A2ALU4 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Shroom2A2ALU4 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Shroom2A2ALU4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC24.47■■□□□ 1.51
Shroom2A2ALU4 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Shroom2A2ALU4 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC24.47■■□□□ 1.51
Shroom2A2ALU4 Gm17420-201ENSMUST00000164753 153 ntBASIC24.47■■□□□ 1.51
Shroom2A2ALU4 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC24.47■■□□□ 1.51
Shroom2A2ALU4 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Shroom2A2ALU4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC24.47■■□□□ 1.51
Shroom2A2ALU4 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Shroom2A2ALU4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Shroom2A2ALU4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Shroom2A2ALU4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Shroom2A2ALU4 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Shroom2A2ALU4 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Shroom2A2ALU4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Shroom2A2ALU4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Shroom2A2ALU4 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
Shroom2A2ALU4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Shroom2A2ALU4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Shroom2A2ALU4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Shroom2A2ALU4 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Shroom2A2ALU4 Gm12390-201ENSMUST00000117897 397 ntBASIC24.45■■□□□ 1.51
Shroom2A2ALU4 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC24.45■■□□□ 1.51
Shroom2A2ALU4 Gm16026-204ENSMUST00000162652 683 ntBASIC24.45■■□□□ 1.51
Shroom2A2ALU4 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC24.45■■□□□ 1.51
Shroom2A2ALU4 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC24.45■■□□□ 1.51
Shroom2A2ALU4 Gm27892-201ENSMUST00000185017 106 ntBASIC24.45■■□□□ 1.51
Shroom2A2ALU4 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Shroom2A2ALU4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC24.45■■□□□ 1.5
Shroom2A2ALU4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Shroom2A2ALU4 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Shroom2A2ALU4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Shroom2A2ALU4 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Shroom2A2ALU4 Gm9719-201ENSMUST00000162765 543 ntBASIC24.45■■□□□ 1.5
Shroom2A2ALU4 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Shroom2A2ALU4 Gm7172-201ENSMUST00000218047 1152 ntBASIC24.45■■□□□ 1.5
Shroom2A2ALU4 Shd-206ENSMUST00000225145 998 ntBASIC24.45■■□□□ 1.5
Shroom2A2ALU4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Shroom2A2ALU4 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Shroom2A2ALU4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Shroom2A2ALU4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Shroom2A2ALU4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Shroom2A2ALU4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms