Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc112A0AUP1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc112A0AUP1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc112A0AUP1 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc112A0AUP1 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc112A0AUP1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc112A0AUP1 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc112A0AUP1 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc112A0AUP1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ccdc112A0AUP1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc112A0AUP1 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc112A0AUP1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ccdc112A0AUP1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Ccdc112A0AUP1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.96■□□□□ 0.47
Ccdc112A0AUP1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc112A0AUP1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc112A0AUP1 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.96■□□□□ 0.47
Ccdc112A0AUP1 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc112A0AUP1 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc112A0AUP1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc112A0AUP1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ccdc112A0AUP1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc112A0AUP1 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.96■□□□□ 0.47
Ccdc112A0AUP1 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc112A0AUP1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Ccdc112A0AUP1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc112A0AUP1 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.94■□□□□ 0.46
Ccdc112A0AUP1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc112A0AUP1 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc112A0AUP1 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc112A0AUP1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc112A0AUP1 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc112A0AUP1 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Ccdc112A0AUP1 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc112A0AUP1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.94■□□□□ 0.46
Ccdc112A0AUP1 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.94■□□□□ 0.46
Ccdc112A0AUP1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ccdc112A0AUP1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc112A0AUP1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc112A0AUP1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ccdc112A0AUP1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc112A0AUP1 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.94■□□□□ 0.46
Ccdc112A0AUP1 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc112A0AUP1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ccdc112A0AUP1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc112A0AUP1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc112A0AUP1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc112A0AUP1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc112A0AUP1 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc112A0AUP1 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc112A0AUP1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc112A0AUP1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc112A0AUP1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc112A0AUP1 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc112A0AUP1 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc112A0AUP1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc112A0AUP1 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc112A0AUP1 Gm6345-202ENSMUST00000180900 204 ntBASIC17.93■□□□□ 0.46
Ccdc112A0AUP1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Ccdc112A0AUP1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.93■□□□□ 0.46
Ccdc112A0AUP1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc112A0AUP1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc112A0AUP1 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc112A0AUP1 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc112A0AUP1 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms