Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc194A0A140LIT1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ccdc194A0A140LIT1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc194A0A140LIT1 Gm5587-201ENSMUST00000206270 674 ntBASIC15.66■□□□□ 0.1
Ccdc194A0A140LIT1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc194A0A140LIT1 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc194A0A140LIT1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc194A0A140LIT1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc194A0A140LIT1 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc194A0A140LIT1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc194A0A140LIT1 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccdc194A0A140LIT1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc194A0A140LIT1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc194A0A140LIT1 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc194A0A140LIT1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc194A0A140LIT1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Mir6404-201ENSMUST00000183699 94 ntBASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc194A0A140LIT1 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc194A0A140LIT1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc194A0A140LIT1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc194A0A140LIT1 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc194A0A140LIT1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc194A0A140LIT1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc194A0A140LIT1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc194A0A140LIT1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc194A0A140LIT1 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc194A0A140LIT1 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc194A0A140LIT1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc194A0A140LIT1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc194A0A140LIT1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc194A0A140LIT1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.63■□□□□ 0.09
Ccdc194A0A140LIT1 Gm6257-201ENSMUST00000163864 910 ntBASIC15.63■□□□□ 0.09
Ccdc194A0A140LIT1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc194A0A140LIT1 Gm10231-201ENSMUST00000181584 441 ntBASIC15.63■□□□□ 0.09
Ccdc194A0A140LIT1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc194A0A140LIT1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.63■□□□□ 0.09
Ccdc194A0A140LIT1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc194A0A140LIT1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc194A0A140LIT1 Gm10175-202ENSMUST00000208752 441 ntBASIC15.63■□□□□ 0.09
Ccdc194A0A140LIT1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc194A0A140LIT1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc194A0A140LIT1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc194A0A140LIT1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc194A0A140LIT1 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms