Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5580A0A0N4SVP8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5580A0A0N4SVP8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5580A0A0N4SVP8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5580A0A0N4SVP8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5580A0A0N4SVP8 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.16■□□□□ 0.34
Gm5580A0A0N4SVP8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5580A0A0N4SVP8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Gm5580A0A0N4SVP8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5580A0A0N4SVP8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.16■□□□□ 0.34
Gm5580A0A0N4SVP8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.16■□□□□ 0.34
Gm5580A0A0N4SVP8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5580A0A0N4SVP8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.16■□□□□ 0.34
Gm5580A0A0N4SVP8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5580A0A0N4SVP8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5580A0A0N4SVP8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5580A0A0N4SVP8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5580A0A0N4SVP8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5580A0A0N4SVP8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5580A0A0N4SVP8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5580A0A0N4SVP8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5580A0A0N4SVP8 Sybu-209ENSMUST00000228639 4113 ntBASIC17.15■□□□□ 0.34
Gm5580A0A0N4SVP8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5580A0A0N4SVP8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5580A0A0N4SVP8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Gm5580A0A0N4SVP8 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5580A0A0N4SVP8 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5580A0A0N4SVP8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5580A0A0N4SVP8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5580A0A0N4SVP8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5580A0A0N4SVP8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5580A0A0N4SVP8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5580A0A0N4SVP8 Gm18032-201ENSMUST00000222541 538 ntBASIC17.15■□□□□ 0.34
Gm5580A0A0N4SVP8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5580A0A0N4SVP8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Gm5580A0A0N4SVP8 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Gm5580A0A0N4SVP8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5580A0A0N4SVP8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5580A0A0N4SVP8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5580A0A0N4SVP8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Gm5580A0A0N4SVP8 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.15■□□□□ 0.34
Gm5580A0A0N4SVP8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Gm5580A0A0N4SVP8 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Gm5580A0A0N4SVP8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Gm5580A0A0N4SVP8 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Gm5580A0A0N4SVP8 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5580A0A0N4SVP8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5580A0A0N4SVP8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5580A0A0N4SVP8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.13■□□□□ 0.33
Gm5580A0A0N4SVP8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.13■□□□□ 0.33
Gm5580A0A0N4SVP8 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5580A0A0N4SVP8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5580A0A0N4SVP8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5580A0A0N4SVP8 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5580A0A0N4SVP8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5580A0A0N4SVP8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5580A0A0N4SVP8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.13■□□□□ 0.33
Gm5580A0A0N4SVP8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.13■□□□□ 0.33
Gm5580A0A0N4SVP8 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5580A0A0N4SVP8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5580A0A0N4SVP8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5580A0A0N4SVP8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5580A0A0N4SVP8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5580A0A0N4SVP8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5580A0A0N4SVP8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5580A0A0N4SVP8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5580A0A0N4SVP8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5580A0A0N4SVP8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5580A0A0N4SVP8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5580A0A0N4SVP8 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5580A0A0N4SVP8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5580A0A0N4SVP8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5580A0A0N4SVP8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms