Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scn2aA0A0J9YTW6 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scn2aA0A0J9YTW6 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn2aA0A0J9YTW6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Scn2aA0A0J9YTW6 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn2aA0A0J9YTW6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scn2aA0A0J9YTW6 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.46□□□□□ -0.09
Scn2aA0A0J9YTW6 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn2aA0A0J9YTW6 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scn2aA0A0J9YTW6 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn2aA0A0J9YTW6 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn2aA0A0J9YTW6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Scn2aA0A0J9YTW6 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Scn2aA0A0J9YTW6 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn2aA0A0J9YTW6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn2aA0A0J9YTW6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Scn2aA0A0J9YTW6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scn2aA0A0J9YTW6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn2aA0A0J9YTW6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.46□□□□□ -0.09
Scn2aA0A0J9YTW6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn2aA0A0J9YTW6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn2aA0A0J9YTW6 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn2aA0A0J9YTW6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
Scn2aA0A0J9YTW6 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.46□□□□□ -0.1
Scn2aA0A0J9YTW6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.46□□□□□ -0.1
Scn2aA0A0J9YTW6 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.46□□□□□ -0.1
Scn2aA0A0J9YTW6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.46□□□□□ -0.1
Scn2aA0A0J9YTW6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn2aA0A0J9YTW6 Grk6-207ENSMUST00000225925 2769 ntBASIC14.46□□□□□ -0.1
Scn2aA0A0J9YTW6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn2aA0A0J9YTW6 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn2aA0A0J9YTW6 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Gm11780-201ENSMUST00000136880 516 ntBASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Gm6089-201ENSMUST00000197666 938 ntBASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn2aA0A0J9YTW6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Gm18195-201ENSMUST00000207604 706 ntBASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms