Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gm10676-201ENSMUST00000098778 3221 ntBASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gm43598-201ENSMUST00000202482 2479 ntBASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Il3ra-202ENSMUST00000223589 738 ntBASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gm37736-201ENSMUST00000193564 2802 ntBASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Ksr1-207ENSMUST00000226282 5260 ntBASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9d-4A0A0G2JG37 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav9d-4A0A0G2JG37 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav9d-4A0A0G2JG37 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav9d-4A0A0G2JG37 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Trav9d-4A0A0G2JG37 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav9d-4A0A0G2JG37 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC10.77□□□□□ -0.68
Trav9d-4A0A0G2JG37 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC10.77□□□□□ -0.68
Trav9d-4A0A0G2JG37 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav9d-4A0A0G2JG37 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav9d-4A0A0G2JG37 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav9d-4A0A0G2JG37 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav9d-4A0A0G2JG37 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav9d-4A0A0G2JG37 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav9d-4A0A0G2JG37 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC10.77□□□□□ -0.68
Trav9d-4A0A0G2JG37 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav9d-4A0A0G2JG37 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav9d-4A0A0G2JG37 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trav9d-4A0A0G2JG37 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9d-4A0A0G2JG37 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC10.77□□□□□ -0.69
Trav9d-4A0A0G2JG37 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9d-4A0A0G2JG37 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9d-4A0A0G2JG37 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Trav9d-4A0A0G2JG37 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9d-4A0A0G2JG37 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trav9d-4A0A0G2JG37 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9d-4A0A0G2JG37 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9d-4A0A0G2JG37 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Trav9d-4A0A0G2JG37 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9d-4A0A0G2JG37 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC10.77□□□□□ -0.69
Trav9d-4A0A0G2JG37 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trav9d-4A0A0G2JG37 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9d-4A0A0G2JG37 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9d-4A0A0G2JG37 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9d-4A0A0G2JG37 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav9d-4A0A0G2JG37 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9d-4A0A0G2JG37 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9d-4A0A0G2JG37 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9d-4A0A0G2JG37 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9d-4A0A0G2JG37 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms