Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Trav19A0A0B4J1K4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav19A0A0B4J1K4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav19A0A0B4J1K4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav19A0A0B4J1K4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav19A0A0B4J1K4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav19A0A0B4J1K4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Trav19A0A0B4J1K4 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav19A0A0B4J1K4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Trav19A0A0B4J1K4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav19A0A0B4J1K4 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav19A0A0B4J1K4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav19A0A0B4J1K4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC11.77□□□□□ -0.53
Trav19A0A0B4J1K4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav19A0A0B4J1K4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC11.77□□□□□ -0.53
Trav19A0A0B4J1K4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav19A0A0B4J1K4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav19A0A0B4J1K4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav19A0A0B4J1K4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.77□□□□□ -0.53
Trav19A0A0B4J1K4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav19A0A0B4J1K4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav19A0A0B4J1K4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Trav19A0A0B4J1K4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav19A0A0B4J1K4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav19A0A0B4J1K4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trav19A0A0B4J1K4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav19A0A0B4J1K4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav19A0A0B4J1K4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav19A0A0B4J1K4 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav19A0A0B4J1K4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav19A0A0B4J1K4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav19A0A0B4J1K4 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav19A0A0B4J1K4 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav19A0A0B4J1K4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Mir5122-201ENSMUST00000175004 89 ntBASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Gm8520-201ENSMUST00000186517 868 ntBASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav19A0A0B4J1K4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Gm29994-201ENSMUST00000195495 1193 ntBASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Arhgef33-211ENSMUST00000225658 473 ntBASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav19A0A0B4J1K4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav19A0A0B4J1K4 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms