Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv3A0A0A6YYE2 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.15□□□□□ -0.46
Trbv3A0A0A6YYE2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv3A0A0A6YYE2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv3A0A0A6YYE2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv3A0A0A6YYE2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trbv3A0A0A6YYE2 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.15□□□□□ -0.46
Trbv3A0A0A6YYE2 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.15□□□□□ -0.46
Trbv3A0A0A6YYE2 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trbv3A0A0A6YYE2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv3A0A0A6YYE2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv3A0A0A6YYE2 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv3A0A0A6YYE2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv3A0A0A6YYE2 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trbv3A0A0A6YYE2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trbv3A0A0A6YYE2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Trbv3A0A0A6YYE2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.47
Trbv3A0A0A6YYE2 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trbv3A0A0A6YYE2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 Gm27275-201ENSMUST00000184318 272 ntBASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 Gm29707-201ENSMUST00000196325 491 ntBASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Trbv3A0A0A6YYE2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv3A0A0A6YYE2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms