Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Gm29518-201ENSMUST00000190858 372 ntBASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Gm17808-201ENSMUST00000200859 894 ntBASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-47A0A0A6YY41 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-47A0A0A6YY41 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.97□□□□□ -0.33
Ighv1-47A0A0A6YY41 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-47A0A0A6YY41 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-47A0A0A6YY41 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-47A0A0A6YY41 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-47A0A0A6YY41 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.97□□□□□ -0.33
Ighv1-47A0A0A6YY41 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-47A0A0A6YY41 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-47A0A0A6YY41 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-47A0A0A6YY41 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-47A0A0A6YY41 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-47A0A0A6YY41 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-47A0A0A6YY41 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-47A0A0A6YY41 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-47A0A0A6YY41 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-47A0A0A6YY41 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-47A0A0A6YY41 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-47A0A0A6YY41 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-47A0A0A6YY41 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-47A0A0A6YY41 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-47A0A0A6YY41 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-47A0A0A6YY41 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-47A0A0A6YY41 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Ighv1-47A0A0A6YY41 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms