Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.12□□□□□ -0.47
Trav21-dv12A0A075B6C4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav21-dv12A0A075B6C4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Gm5587-201ENSMUST00000206270 674 ntBASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms