Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-7A0A075B6B0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-7A0A075B6B0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-7A0A075B6B0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-7A0A075B6B0 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav6d-7A0A075B6B0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-7A0A075B6B0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav6d-7A0A075B6B0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-7A0A075B6B0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-7A0A075B6B0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-7A0A075B6B0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-7A0A075B6B0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-7A0A075B6B0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms