Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trdv1A0A075B657 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trdv1A0A075B657 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trdv1A0A075B657 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Trdv1A0A075B657 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12□□□□□ -0.49
Trdv1A0A075B657 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trdv1A0A075B657 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trdv1A0A075B657 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Trdv1A0A075B657 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trdv1A0A075B657 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trdv1A0A075B657 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 BC037039-201ENSMUST00000192003 2205 ntBASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv1A0A075B657 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv1A0A075B657 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv1A0A075B657 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv1A0A075B657 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trdv1A0A075B657 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv1A0A075B657 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC11.97□□□□□ -0.49
Trdv1A0A075B657 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Trdv1A0A075B657 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv1A0A075B657 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv1A0A075B657 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv1A0A075B657 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv1A0A075B657 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trdv1A0A075B657 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Trdv1A0A075B657 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv1A0A075B657 Gm29340-201ENSMUST00000188763 3854 ntBASIC11.97□□□□□ -0.49
Trdv1A0A075B657 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Trdv1A0A075B657 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Trdv1A0A075B657 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.97□□□□□ -0.49
Trdv1A0A075B657 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv1A0A075B657 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC11.97□□□□□ -0.49
Trdv1A0A075B657 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv1A0A075B657 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC11.97□□□□□ -0.49
Trdv1A0A075B657 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trdv1A0A075B657 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv1A0A075B657 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trdv1A0A075B657 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv1A0A075B657 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 309.5 ms