Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Rps4l-201ENSMUST00000071745 943 ntBASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-1A0A075B644 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Gm44771-201ENSMUST00000206975 626 ntBASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Gm18195-201ENSMUST00000207604 706 ntBASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Trav13-1A0A075B644 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Gm6376-201ENSMUST00000209407 580 ntBASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms