Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 Gm45747-201ENSMUST00000212203 999 ntBASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8n-2A0A075B633 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav8n-2A0A075B633 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav8n-2A0A075B633 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8n-2A0A075B633 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav8n-2A0A075B633 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8n-2A0A075B633 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav8n-2A0A075B633 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8n-2A0A075B633 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8n-2A0A075B633 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8n-2A0A075B633 Thap2-203ENSMUST00000218989 527 ntBASIC14.33□□□□□ -0.12
Trav8n-2A0A075B633 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8n-2A0A075B633 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8n-2A0A075B633 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.33□□□□□ -0.12
Trav8n-2A0A075B633 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8n-2A0A075B633 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8n-2A0A075B633 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav8n-2A0A075B633 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8n-2A0A075B633 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8n-2A0A075B633 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8n-2A0A075B633 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8n-2A0A075B633 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8n-2A0A075B633 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav8n-2A0A075B633 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Rprl2-201ENSMUST00000157150 290 ntBASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 AA543401-201ENSMUST00000164248 1269 ntBASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Gm44335-201ENSMUST00000196879 141 ntBASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Gm44297-201ENSMUST00000198304 141 ntBASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Gm44346-201ENSMUST00000198851 141 ntBASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms