Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Gm15847-201ENSMUST00000121417 1065 ntBASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Gm12821-201ENSMUST00000120022 600 ntBASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Gm7514-201ENSMUST00000209475 934 ntBASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 AC166341.7-201ENSMUST00000221698 126 ntBASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 CT025610.1-201ENSMUST00000224552 1786 ntBASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4n-4A0A075B615 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Gm7291-201ENSMUST00000199147 382 ntBASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms