Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav1A0A075B5Z4 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav1A0A075B5Z4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav1A0A075B5Z4 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Trav1A0A075B5Z4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav1A0A075B5Z4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav1A0A075B5Z4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Trav1A0A075B5Z4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.6□□□□□ -0.07
Trav1A0A075B5Z4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav1A0A075B5Z4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav1A0A075B5Z4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav1A0A075B5Z4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav1A0A075B5Z4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav1A0A075B5Z4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav1A0A075B5Z4 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav1A0A075B5Z4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Trav1A0A075B5Z4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav1A0A075B5Z4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav1A0A075B5Z4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav1A0A075B5Z4 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav1A0A075B5Z4 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav1A0A075B5Z4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav1A0A075B5Z4 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav1A0A075B5Z4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav1A0A075B5Z4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav1A0A075B5Z4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav1A0A075B5Z4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav1A0A075B5Z4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav1A0A075B5Z4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav1A0A075B5Z4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav1A0A075B5Z4 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.59□□□□□ -0.07
Trav1A0A075B5Z4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav1A0A075B5Z4 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav1A0A075B5Z4 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav1A0A075B5Z4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav1A0A075B5Z4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav1A0A075B5Z4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav1A0A075B5Z4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav1A0A075B5Z4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav1A0A075B5Z4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav1A0A075B5Z4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav1A0A075B5Z4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.58□□□□□ -0.07
Trav1A0A075B5Z4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav1A0A075B5Z4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav1A0A075B5Z4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav1A0A075B5Z4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.58□□□□□ -0.08
Trav1A0A075B5Z4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav1A0A075B5Z4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Trav1A0A075B5Z4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav1A0A075B5Z4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav1A0A075B5Z4 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Trav1A0A075B5Z4 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav1A0A075B5Z4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.58□□□□□ -0.08
Trav1A0A075B5Z4 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav1A0A075B5Z4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav1A0A075B5Z4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav1A0A075B5Z4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav1A0A075B5Z4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav1A0A075B5Z4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav1A0A075B5Z4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav1A0A075B5Z4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav1A0A075B5Z4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav1A0A075B5Z4 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav1A0A075B5Z4 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav1A0A075B5Z4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav1A0A075B5Z4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Trav1A0A075B5Z4 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms