Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.77■□□□□ 0.12
Trbv4A0A075B5I2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv4A0A075B5I2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv4A0A075B5I2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv4A0A075B5I2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv4A0A075B5I2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.77■□□□□ 0.12
Trbv4A0A075B5I2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv4A0A075B5I2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.77■□□□□ 0.11
Trbv4A0A075B5I2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv4A0A075B5I2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv4A0A075B5I2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.77■□□□□ 0.11
Trbv4A0A075B5I2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv4A0A075B5I2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv4A0A075B5I2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trbv4A0A075B5I2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv4A0A075B5I2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv4A0A075B5I2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv4A0A075B5I2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trbv4A0A075B5I2 Gm7977-201ENSMUST00000193787 748 ntBASIC15.76■□□□□ 0.11
Trbv4A0A075B5I2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv4A0A075B5I2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv4A0A075B5I2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trbv4A0A075B5I2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Trbv4A0A075B5I2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv4A0A075B5I2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv4A0A075B5I2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv4A0A075B5I2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv4A0A075B5I2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv4A0A075B5I2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv4A0A075B5I2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trbv4A0A075B5I2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.74■□□□□ 0.11
Trbv4A0A075B5I2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv4A0A075B5I2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv4A0A075B5I2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv4A0A075B5I2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv4A0A075B5I2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv4A0A075B5I2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv4A0A075B5I2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv4A0A075B5I2 Gm12895-201ENSMUST00000122214 226 ntBASIC15.74■□□□□ 0.11
Trbv4A0A075B5I2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv4A0A075B5I2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv4A0A075B5I2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv4A0A075B5I2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv4A0A075B5I2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.74■□□□□ 0.11
Trbv4A0A075B5I2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Trbv4A0A075B5I2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv4A0A075B5I2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv4A0A075B5I2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv4A0A075B5I2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv4A0A075B5I2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv4A0A075B5I2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv4A0A075B5I2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Trbv4A0A075B5I2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv4A0A075B5I2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv4A0A075B5I2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv4A0A075B5I2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv4A0A075B5I2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv4A0A075B5I2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv4A0A075B5I2 Gm12497-201ENSMUST00000138778 237 ntBASIC15.73■□□□□ 0.11
Trbv4A0A075B5I2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv4A0A075B5I2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.73■□□□□ 0.11
Trbv4A0A075B5I2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.73■□□□□ 0.11
Trbv4A0A075B5I2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv4A0A075B5I2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv4A0A075B5I2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv4A0A075B5I2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv4A0A075B5I2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv4A0A075B5I2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv4A0A075B5I2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv4A0A075B5I2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trbv4A0A075B5I2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv4A0A075B5I2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv4A0A075B5I2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms