Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
H2afb2S4R1M3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb2S4R1M3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb2S4R1M3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb2S4R1M3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb2S4R1M3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb2S4R1M3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb2S4R1M3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb2S4R1M3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb2S4R1M3 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.75■□□□□ 0.11
H2afb2S4R1M3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb2S4R1M3 Gm27357-201ENSMUST00000183754 135 ntBASIC15.75■□□□□ 0.11
H2afb2S4R1M3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.75■□□□□ 0.11
H2afb2S4R1M3 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
H2afb2S4R1M3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb2S4R1M3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
H2afb2S4R1M3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb2S4R1M3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
H2afb2S4R1M3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb2S4R1M3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
H2afb2S4R1M3 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb2S4R1M3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb2S4R1M3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb2S4R1M3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb2S4R1M3 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Gm15165-201ENSMUST00000118140 502 ntBASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Gm8825-201ENSMUST00000182565 998 ntBASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Gm4518-201ENSMUST00000182638 718 ntBASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Gm9172-201ENSMUST00000212092 954 ntBASIC15.73■□□□□ 0.11
H2afb2S4R1M3 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb2S4R1M3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb2S4R1M3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms