Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmg20bQ9Z104 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Hmg20bQ9Z104 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 Gm18622-201ENSMUST00000219361 595 ntBASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmg20bQ9Z104 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Hmg20bQ9Z104 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.53■□□□□ 0.56
Hmg20bQ9Z104 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmg20bQ9Z104 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmg20bQ9Z104 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.53■□□□□ 0.56
Hmg20bQ9Z104 Gm12644-201ENSMUST00000119935 606 ntBASIC18.53■□□□□ 0.56
Hmg20bQ9Z104 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.53■□□□□ 0.56
Hmg20bQ9Z104 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.53■□□□□ 0.56
Hmg20bQ9Z104 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hmg20bQ9Z104 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.53■□□□□ 0.56
Hmg20bQ9Z104 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.53■□□□□ 0.56
Hmg20bQ9Z104 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hmg20bQ9Z104 Gm21362-201ENSMUST00000194272 928 ntBASIC18.53■□□□□ 0.56
Hmg20bQ9Z104 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmg20bQ9Z104 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Hmg20bQ9Z104 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Hmg20bQ9Z104 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmg20bQ9Z104 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmg20bQ9Z104 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmg20bQ9Z104 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hmg20bQ9Z104 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmg20bQ9Z104 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hmg20bQ9Z104 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmg20bQ9Z104 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Hmg20bQ9Z104 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmg20bQ9Z104 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmg20bQ9Z104 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmg20bQ9Z104 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hmg20bQ9Z104 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmg20bQ9Z104 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.52■□□□□ 0.56
Hmg20bQ9Z104 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hmg20bQ9Z104 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmg20bQ9Z104 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Hmg20bQ9Z104 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hmg20bQ9Z104 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hmg20bQ9Z104 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmg20bQ9Z104 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmg20bQ9Z104 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmg20bQ9Z104 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hmg20bQ9Z104 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hmg20bQ9Z104 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms