Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.08■□□□□ 0.33
Nr1h3Q9Z0Y9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nr1h3Q9Z0Y9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nr1h3Q9Z0Y9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nr1h3Q9Z0Y9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.08■□□□□ 0.32
Nr1h3Q9Z0Y9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.08■□□□□ 0.32
Nr1h3Q9Z0Y9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.08■□□□□ 0.32
Nr1h3Q9Z0Y9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nr1h3Q9Z0Y9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nr1h3Q9Z0Y9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nr1h3Q9Z0Y9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nr1h3Q9Z0Y9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nr1h3Q9Z0Y9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nr1h3Q9Z0Y9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
Nr1h3Q9Z0Y9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Nr1h3Q9Z0Y9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nr1h3Q9Z0Y9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Nr1h3Q9Z0Y9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nr1h3Q9Z0Y9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.07■□□□□ 0.32
Nr1h3Q9Z0Y9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1h3Q9Z0Y9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1h3Q9Z0Y9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1h3Q9Z0Y9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1h3Q9Z0Y9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1h3Q9Z0Y9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.07■□□□□ 0.32
Nr1h3Q9Z0Y9 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.07■□□□□ 0.32
Nr1h3Q9Z0Y9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1h3Q9Z0Y9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1h3Q9Z0Y9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.07■□□□□ 0.32
Nr1h3Q9Z0Y9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1h3Q9Z0Y9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1h3Q9Z0Y9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1h3Q9Z0Y9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1h3Q9Z0Y9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1h3Q9Z0Y9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1h3Q9Z0Y9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1h3Q9Z0Y9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1h3Q9Z0Y9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1h3Q9Z0Y9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1h3Q9Z0Y9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Gm27646-201ENSMUST00000183989 110 ntBASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h3Q9Z0Y9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1h3Q9Z0Y9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Nr1h3Q9Z0Y9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Nr1h3Q9Z0Y9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1h3Q9Z0Y9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Nr1h3Q9Z0Y9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1h3Q9Z0Y9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1h3Q9Z0Y9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1h3Q9Z0Y9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Nr1h3Q9Z0Y9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Nr1h3Q9Z0Y9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1h3Q9Z0Y9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.05■□□□□ 0.32
Nr1h3Q9Z0Y9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1h3Q9Z0Y9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1h3Q9Z0Y9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Nr1h3Q9Z0Y9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Nr1h3Q9Z0Y9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1h3Q9Z0Y9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Nr1h3Q9Z0Y9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Nr1h3Q9Z0Y9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1h3Q9Z0Y9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1h3Q9Z0Y9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1h3Q9Z0Y9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.04■□□□□ 0.32
Nr1h3Q9Z0Y9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1h3Q9Z0Y9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Nr1h3Q9Z0Y9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1h3Q9Z0Y9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms