Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcb1Q9Z0H3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcb1Q9Z0H3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcb1Q9Z0H3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcb1Q9Z0H3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcb1Q9Z0H3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcb1Q9Z0H3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcb1Q9Z0H3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcb1Q9Z0H3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcb1Q9Z0H3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcb1Q9Z0H3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcb1Q9Z0H3 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.27■□□□□ 0.2
Smarcb1Q9Z0H3 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.27■□□□□ 0.2
Smarcb1Q9Z0H3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcb1Q9Z0H3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcb1Q9Z0H3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcb1Q9Z0H3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Smarcb1Q9Z0H3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcb1Q9Z0H3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smarcb1Q9Z0H3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smarcb1Q9Z0H3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smarcb1Q9Z0H3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smarcb1Q9Z0H3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smarcb1Q9Z0H3 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smarcb1Q9Z0H3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Gm27300-201ENSMUST00000184085 97 ntBASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Gm27335-201ENSMUST00000184758 97 ntBASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcb1Q9Z0H3 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 Gm11594-201ENSMUST00000122313 162 ntBASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcb1Q9Z0H3 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms