Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.28□□□□□ -0.44
CcsQ9WU84 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.28□□□□□ -0.44
CcsQ9WU84 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.28□□□□□ -0.44
CcsQ9WU84 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcsQ9WU84 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CcsQ9WU84 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcsQ9WU84 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CcsQ9WU84 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcsQ9WU84 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcsQ9WU84 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
CcsQ9WU84 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CcsQ9WU84 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CcsQ9WU84 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CcsQ9WU84 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcsQ9WU84 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcsQ9WU84 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcsQ9WU84 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
CcsQ9WU84 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcsQ9WU84 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcsQ9WU84 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CcsQ9WU84 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CcsQ9WU84 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CcsQ9WU84 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CcsQ9WU84 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CcsQ9WU84 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CcsQ9WU84 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CcsQ9WU84 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CcsQ9WU84 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CcsQ9WU84 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
CcsQ9WU84 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CcsQ9WU84 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.27□□□□□ -0.44
CcsQ9WU84 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CcsQ9WU84 Gm6433-201ENSMUST00000118634 875 ntBASIC12.27□□□□□ -0.45
CcsQ9WU84 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CcsQ9WU84 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CcsQ9WU84 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CcsQ9WU84 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.27□□□□□ -0.45
CcsQ9WU84 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.27□□□□□ -0.45
CcsQ9WU84 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CcsQ9WU84 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CcsQ9WU84 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CcsQ9WU84 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CcsQ9WU84 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CcsQ9WU84 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CcsQ9WU84 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
CcsQ9WU84 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CcsQ9WU84 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CcsQ9WU84 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CcsQ9WU84 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
CcsQ9WU84 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CcsQ9WU84 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CcsQ9WU84 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CcsQ9WU84 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
CcsQ9WU84 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CcsQ9WU84 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.27□□□□□ -0.45
CcsQ9WU84 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CcsQ9WU84 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CcsQ9WU84 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CcsQ9WU84 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CcsQ9WU84 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CcsQ9WU84 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CcsQ9WU84 Gm13401-201ENSMUST00000117074 291 ntBASIC12.26□□□□□ -0.45
CcsQ9WU84 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.26□□□□□ -0.45
CcsQ9WU84 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.26□□□□□ -0.45
CcsQ9WU84 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CcsQ9WU84 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CcsQ9WU84 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.26□□□□□ -0.45
CcsQ9WU84 Gm43799-201ENSMUST00000201845 579 ntBASIC12.26□□□□□ -0.45
CcsQ9WU84 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CcsQ9WU84 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CcsQ9WU84 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CcsQ9WU84 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CcsQ9WU84 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CcsQ9WU84 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CcsQ9WU84 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CcsQ9WU84 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CcsQ9WU84 App-207ENSMUST00000227737 2827 ntBASIC12.26□□□□□ -0.45
CcsQ9WU84 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CcsQ9WU84 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CcsQ9WU84 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CcsQ9WU84 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CcsQ9WU84 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
CcsQ9WU84 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CcsQ9WU84 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CcsQ9WU84 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CcsQ9WU84 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CcsQ9WU84 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CcsQ9WU84 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CcsQ9WU84 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
CcsQ9WU84 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CcsQ9WU84 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CcsQ9WU84 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CcsQ9WU84 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CcsQ9WU84 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CcsQ9WU84 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.25□□□□□ -0.45
CcsQ9WU84 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CcsQ9WU84 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CcsQ9WU84 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CcsQ9WU84 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CcsQ9WU84 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms