Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn2Q9R0A1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn2Q9R0A1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn2Q9R0A1 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.12■□□□□ 0.17
Clcn2Q9R0A1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn2Q9R0A1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn2Q9R0A1 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn2Q9R0A1 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn2Q9R0A1 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Clcn2Q9R0A1 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn2Q9R0A1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.11■□□□□ 0.17
Clcn2Q9R0A1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn2Q9R0A1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Clcn2Q9R0A1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn2Q9R0A1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Clcn2Q9R0A1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn2Q9R0A1 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn2Q9R0A1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Clcn2Q9R0A1 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
Clcn2Q9R0A1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn2Q9R0A1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn2Q9R0A1 BC037039-201ENSMUST00000192003 2205 ntBASIC16.11■□□□□ 0.17
Clcn2Q9R0A1 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn2Q9R0A1 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn2Q9R0A1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn2Q9R0A1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Gm10819-201ENSMUST00000099988 561 ntBASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn2Q9R0A1 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn2Q9R0A1 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.09■□□□□ 0.17
Clcn2Q9R0A1 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn2Q9R0A1 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.09■□□□□ 0.17
Clcn2Q9R0A1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn2Q9R0A1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Clcn2Q9R0A1 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn2Q9R0A1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn2Q9R0A1 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn2Q9R0A1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn2Q9R0A1 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.09■□□□□ 0.17
Clcn2Q9R0A1 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.09■□□□□ 0.17
Clcn2Q9R0A1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn2Q9R0A1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn2Q9R0A1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn2Q9R0A1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn2Q9R0A1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn2Q9R0A1 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn2Q9R0A1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn2Q9R0A1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Clcn2Q9R0A1 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.08■□□□□ 0.17
Clcn2Q9R0A1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Clcn2Q9R0A1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Clcn2Q9R0A1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Clcn2Q9R0A1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Clcn2Q9R0A1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Clcn2Q9R0A1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Clcn2Q9R0A1 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Clcn2Q9R0A1 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Clcn2Q9R0A1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.08■□□□□ 0.16
Clcn2Q9R0A1 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clcn2Q9R0A1 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.08■□□□□ 0.16
Clcn2Q9R0A1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clcn2Q9R0A1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clcn2Q9R0A1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Clcn2Q9R0A1 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Clcn2Q9R0A1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.08■□□□□ 0.16
Clcn2Q9R0A1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clcn2Q9R0A1 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Clcn2Q9R0A1 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.08■□□□□ 0.16
Clcn2Q9R0A1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clcn2Q9R0A1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clcn2Q9R0A1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clcn2Q9R0A1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clcn2Q9R0A1 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Clcn2Q9R0A1 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Clcn2Q9R0A1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms