Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom3Q9QXN0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.74■□□□□ 0.11
Shroom3Q9QXN0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom3Q9QXN0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom3Q9QXN0 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom3Q9QXN0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom3Q9QXN0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom3Q9QXN0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom3Q9QXN0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom3Q9QXN0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom3Q9QXN0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Shroom3Q9QXN0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom3Q9QXN0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom3Q9QXN0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
Shroom3Q9QXN0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom3Q9QXN0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom3Q9QXN0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom3Q9QXN0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.74■□□□□ 0.11
Shroom3Q9QXN0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.74■□□□□ 0.11
Shroom3Q9QXN0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom3Q9QXN0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom3Q9QXN0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom3Q9QXN0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom3Q9QXN0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 Psmb5-202ENSMUST00000227257 622 ntBASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom3Q9QXN0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom3Q9QXN0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom3Q9QXN0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom3Q9QXN0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom3Q9QXN0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom3Q9QXN0 Gm25990-201ENSMUST00000102440 86 ntBASIC15.71■□□□□ 0.11
Shroom3Q9QXN0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.71■□□□□ 0.11
Shroom3Q9QXN0 Gm13312-201ENSMUST00000119631 718 ntBASIC15.71■□□□□ 0.11
Shroom3Q9QXN0 Gm8344-201ENSMUST00000119813 856 ntBASIC15.71■□□□□ 0.11
Shroom3Q9QXN0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom3Q9QXN0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.71■□□□□ 0.11
Shroom3Q9QXN0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.71■□□□□ 0.11
Shroom3Q9QXN0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom3Q9QXN0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom3Q9QXN0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom3Q9QXN0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom3Q9QXN0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom3Q9QXN0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom3Q9QXN0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom3Q9QXN0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.71■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms