Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn5Q9JL35 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Hmgn5Q9JL35 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgn5Q9JL35 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Hmgn5Q9JL35 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.74■□□□□ 0.43
Hmgn5Q9JL35 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgn5Q9JL35 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgn5Q9JL35 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgn5Q9JL35 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgn5Q9JL35 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgn5Q9JL35 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Hmgn5Q9JL35 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.74■□□□□ 0.43
Hmgn5Q9JL35 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgn5Q9JL35 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.74■□□□□ 0.43
Hmgn5Q9JL35 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.74■□□□□ 0.43
Hmgn5Q9JL35 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.74■□□□□ 0.43
Hmgn5Q9JL35 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.74■□□□□ 0.43
Hmgn5Q9JL35 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgn5Q9JL35 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.74■□□□□ 0.43
Hmgn5Q9JL35 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgn5Q9JL35 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Hmgn5Q9JL35 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgn5Q9JL35 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgn5Q9JL35 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgn5Q9JL35 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgn5Q9JL35 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgn5Q9JL35 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
Hmgn5Q9JL35 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.73■□□□□ 0.43
Hmgn5Q9JL35 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgn5Q9JL35 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgn5Q9JL35 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Hmgn5Q9JL35 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Hmgn5Q9JL35 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Hmgn5Q9JL35 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Hmgn5Q9JL35 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgn5Q9JL35 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgn5Q9JL35 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 Mir1199-201ENSMUST00000117015 119 ntBASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 Odf3b-204ENSMUST00000227834 930 ntBASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.72■□□□□ 0.43
Hmgn5Q9JL35 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgn5Q9JL35 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgn5Q9JL35 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgn5Q9JL35 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgn5Q9JL35 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgn5Q9JL35 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgn5Q9JL35 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms