Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Ldb3Q9JKS4 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ldb3Q9JKS4 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ldb3Q9JKS4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ldb3Q9JKS4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Ldb3Q9JKS4 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ldb3Q9JKS4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ldb3Q9JKS4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ldb3Q9JKS4 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.27□□□□□ -0.12
Ldb3Q9JKS4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ldb3Q9JKS4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.27□□□□□ -0.13
Ldb3Q9JKS4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.27□□□□□ -0.13
Ldb3Q9JKS4 Gm43347-201ENSMUST00000200226 580 ntBASIC14.27□□□□□ -0.13
Ldb3Q9JKS4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.27□□□□□ -0.13
Ldb3Q9JKS4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.27□□□□□ -0.13
Ldb3Q9JKS4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ldb3Q9JKS4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ldb3Q9JKS4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ldb3Q9JKS4 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.27□□□□□ -0.13
Ldb3Q9JKS4 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Gm44357-201ENSMUST00000195897 142 ntBASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Gm19658-201ENSMUST00000196231 138 ntBASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Gm44367-201ENSMUST00000196836 138 ntBASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Gm44350-201ENSMUST00000197197 138 ntBASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Gm44390-201ENSMUST00000197533 144 ntBASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Gm44313-201ENSMUST00000198018 138 ntBASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Gm44486-201ENSMUST00000198508 138 ntBASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Gm44314-201ENSMUST00000199263 138 ntBASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Gm44394-201ENSMUST00000199558 138 ntBASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Gm44484-201ENSMUST00000199873 138 ntBASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Gm44466-201ENSMUST00000200264 138 ntBASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Gm44359-201ENSMUST00000200671 138 ntBASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Gm8655-201ENSMUST00000221159 852 ntBASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb3Q9JKS4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.25□□□□□ -0.13
Ldb3Q9JKS4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ldb3Q9JKS4 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb3Q9JKS4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ldb3Q9JKS4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.24□□□□□ -0.13
Ldb3Q9JKS4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms