Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.75■□□□□ 0.43
Cacna1fQ9JIS7 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.75■□□□□ 0.43
Cacna1fQ9JIS7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cacna1fQ9JIS7 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cacna1fQ9JIS7 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cacna1fQ9JIS7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1fQ9JIS7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cacna1fQ9JIS7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1fQ9JIS7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cacna1fQ9JIS7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1fQ9JIS7 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Cacna1fQ9JIS7 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1fQ9JIS7 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.75■□□□□ 0.43
Cacna1fQ9JIS7 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1fQ9JIS7 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1fQ9JIS7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1fQ9JIS7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.75■□□□□ 0.43
Cacna1fQ9JIS7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cacna1fQ9JIS7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1fQ9JIS7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1fQ9JIS7 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.74■□□□□ 0.43
Cacna1fQ9JIS7 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cacna1fQ9JIS7 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1fQ9JIS7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1fQ9JIS7 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1fQ9JIS7 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.74■□□□□ 0.43
Cacna1fQ9JIS7 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.74■□□□□ 0.43
Cacna1fQ9JIS7 Gm10253-201ENSMUST00000194270 940 ntBASIC17.74■□□□□ 0.43
Cacna1fQ9JIS7 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.74■□□□□ 0.43
Cacna1fQ9JIS7 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.74■□□□□ 0.43
Cacna1fQ9JIS7 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1fQ9JIS7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1fQ9JIS7 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.74■□□□□ 0.43
Cacna1fQ9JIS7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1fQ9JIS7 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1fQ9JIS7 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1fQ9JIS7 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1fQ9JIS7 Gm12428-201ENSMUST00000119844 727 ntBASIC17.73■□□□□ 0.43
Cacna1fQ9JIS7 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1fQ9JIS7 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1fQ9JIS7 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.73■□□□□ 0.43
Cacna1fQ9JIS7 Gm7774-201ENSMUST00000200064 533 ntBASIC17.73■□□□□ 0.43
Cacna1fQ9JIS7 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cacna1fQ9JIS7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Cacna1fQ9JIS7 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1fQ9JIS7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1fQ9JIS7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1fQ9JIS7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1fQ9JIS7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1fQ9JIS7 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1fQ9JIS7 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.73■□□□□ 0.43
Cacna1fQ9JIS7 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.73■□□□□ 0.43
Cacna1fQ9JIS7 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1fQ9JIS7 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cacna1fQ9JIS7 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.73■□□□□ 0.43
Cacna1fQ9JIS7 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cacna1fQ9JIS7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.73■□□□□ 0.43
Cacna1fQ9JIS7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1fQ9JIS7 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1fQ9JIS7 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1fQ9JIS7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1fQ9JIS7 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.72■□□□□ 0.43
Cacna1fQ9JIS7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cacna1fQ9JIS7 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1fQ9JIS7 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1fQ9JIS7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1fQ9JIS7 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1fQ9JIS7 Gm13223-201ENSMUST00000118609 747 ntBASIC17.72■□□□□ 0.43
Cacna1fQ9JIS7 Gm14057-201ENSMUST00000120631 482 ntBASIC17.72■□□□□ 0.43
Cacna1fQ9JIS7 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1fQ9JIS7 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.72■□□□□ 0.43
Cacna1fQ9JIS7 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.72■□□□□ 0.43
Cacna1fQ9JIS7 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1fQ9JIS7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1fQ9JIS7 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1fQ9JIS7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1fQ9JIS7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cacna1fQ9JIS7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1fQ9JIS7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1fQ9JIS7 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cacna1fQ9JIS7 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cacna1fQ9JIS7 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.71■□□□□ 0.43
Cacna1fQ9JIS7 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cacna1fQ9JIS7 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.71■□□□□ 0.43
Cacna1fQ9JIS7 Gm38294-201ENSMUST00000192831 381 ntBASIC17.71■□□□□ 0.43
Cacna1fQ9JIS7 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cacna1fQ9JIS7 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.71■□□□□ 0.43
Cacna1fQ9JIS7 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Cacna1fQ9JIS7 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cacna1fQ9JIS7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cacna1fQ9JIS7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cacna1fQ9JIS7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.71■□□□□ 0.43
Cacna1fQ9JIS7 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cacna1fQ9JIS7 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cacna1fQ9JIS7 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.71■□□□□ 0.43
Cacna1fQ9JIS7 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.71■□□□□ 0.43
Cacna1fQ9JIS7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cacna1fQ9JIS7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cacna1fQ9JIS7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.7■□□□□ 0.42
Cacna1fQ9JIS7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms