Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Gm10052-201ENSMUST00000168019 960 ntBASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Gm7729-201ENSMUST00000050143 801 ntBASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccl28Q9JIL2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl28Q9JIL2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Gm44430-201ENSMUST00000203376 995 ntBASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Gm18032-201ENSMUST00000222541 538 ntBASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl28Q9JIL2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms