Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ripk4Q9ERK0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ripk4Q9ERK0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ripk4Q9ERK0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ripk4Q9ERK0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ripk4Q9ERK0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ripk4Q9ERK0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ripk4Q9ERK0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ripk4Q9ERK0 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC19.14■□□□□ 0.65
Ripk4Q9ERK0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.14■□□□□ 0.65
Ripk4Q9ERK0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Ripk4Q9ERK0 Gm12260-201ENSMUST00000122447 411 ntBASIC19.14■□□□□ 0.65
Ripk4Q9ERK0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ripk4Q9ERK0 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.14■□□□□ 0.65
Ripk4Q9ERK0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ripk4Q9ERK0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ripk4Q9ERK0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ripk4Q9ERK0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.14■□□□□ 0.65
Ripk4Q9ERK0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ripk4Q9ERK0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ripk4Q9ERK0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Ripk4Q9ERK0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ripk4Q9ERK0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ripk4Q9ERK0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ripk4Q9ERK0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ripk4Q9ERK0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ripk4Q9ERK0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ripk4Q9ERK0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ripk4Q9ERK0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ripk4Q9ERK0 Gm13036-201ENSMUST00000117799 748 ntBASIC19.13■□□□□ 0.65
Ripk4Q9ERK0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ripk4Q9ERK0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC19.13■□□□□ 0.65
Ripk4Q9ERK0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Ripk4Q9ERK0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.13■□□□□ 0.65
Ripk4Q9ERK0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ripk4Q9ERK0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.13■□□□□ 0.65
Ripk4Q9ERK0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ripk4Q9ERK0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ripk4Q9ERK0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ripk4Q9ERK0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ripk4Q9ERK0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ripk4Q9ERK0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ripk4Q9ERK0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ripk4Q9ERK0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ripk4Q9ERK0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ripk4Q9ERK0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ripk4Q9ERK0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ripk4Q9ERK0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ripk4Q9ERK0 Gm14140-201ENSMUST00000119999 995 ntBASIC19.12■□□□□ 0.65
Ripk4Q9ERK0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ripk4Q9ERK0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ripk4Q9ERK0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ripk4Q9ERK0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.12■□□□□ 0.65
Ripk4Q9ERK0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ripk4Q9ERK0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ripk4Q9ERK0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ripk4Q9ERK0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ripk4Q9ERK0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ripk4Q9ERK0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ripk4Q9ERK0 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ripk4Q9ERK0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ripk4Q9ERK0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ripk4Q9ERK0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ripk4Q9ERK0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ripk4Q9ERK0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ripk4Q9ERK0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ripk4Q9ERK0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ripk4Q9ERK0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ripk4Q9ERK0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ripk4Q9ERK0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ripk4Q9ERK0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ripk4Q9ERK0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ripk4Q9ERK0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms