Protein–RNA interactions for Protein: Q9D9P8

Llcfc1, LLLL and CFNLAS motif-containing protein 1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Llcfc1Q9D9P8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Llcfc1Q9D9P8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Llcfc1Q9D9P8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Llcfc1Q9D9P8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Llcfc1Q9D9P8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Llcfc1Q9D9P8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Llcfc1Q9D9P8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Llcfc1Q9D9P8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Llcfc1Q9D9P8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Llcfc1Q9D9P8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Llcfc1Q9D9P8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Llcfc1Q9D9P8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Llcfc1Q9D9P8 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Llcfc1Q9D9P8 BC037039-201ENSMUST00000192003 2205 ntBASIC16.6■□□□□ 0.25
Llcfc1Q9D9P8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Llcfc1Q9D9P8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Llcfc1Q9D9P8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Llcfc1Q9D9P8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Llcfc1Q9D9P8 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Llcfc1Q9D9P8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Llcfc1Q9D9P8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.59■□□□□ 0.25
Llcfc1Q9D9P8 Gm6623-201ENSMUST00000173570 544 ntBASIC16.59■□□□□ 0.25
Llcfc1Q9D9P8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Llcfc1Q9D9P8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Llcfc1Q9D9P8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Llcfc1Q9D9P8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Llcfc1Q9D9P8 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.59■□□□□ 0.25
Llcfc1Q9D9P8 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Llcfc1Q9D9P8 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Llcfc1Q9D9P8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Llcfc1Q9D9P8 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Llcfc1Q9D9P8 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Llcfc1Q9D9P8 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Llcfc1Q9D9P8 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Llcfc1Q9D9P8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Llcfc1Q9D9P8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
Llcfc1Q9D9P8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Llcfc1Q9D9P8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.58■□□□□ 0.24
Llcfc1Q9D9P8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Llcfc1Q9D9P8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Llcfc1Q9D9P8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Llcfc1Q9D9P8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Llcfc1Q9D9P8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Llcfc1Q9D9P8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Llcfc1Q9D9P8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.58■□□□□ 0.24
Llcfc1Q9D9P8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Llcfc1Q9D9P8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.58■□□□□ 0.24
Llcfc1Q9D9P8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Llcfc1Q9D9P8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Llcfc1Q9D9P8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Llcfc1Q9D9P8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Llcfc1Q9D9P8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.58■□□□□ 0.24
Llcfc1Q9D9P8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Llcfc1Q9D9P8 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Llcfc1Q9D9P8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Llcfc1Q9D9P8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Llcfc1Q9D9P8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Llcfc1Q9D9P8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Llcfc1Q9D9P8 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Llcfc1Q9D9P8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Llcfc1Q9D9P8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Llcfc1Q9D9P8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Llcfc1Q9D9P8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Llcfc1Q9D9P8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Llcfc1Q9D9P8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Llcfc1Q9D9P8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Llcfc1Q9D9P8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.57■□□□□ 0.24
Llcfc1Q9D9P8 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.57■□□□□ 0.24
Llcfc1Q9D9P8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.57■□□□□ 0.24
Llcfc1Q9D9P8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.57■□□□□ 0.24
Llcfc1Q9D9P8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Llcfc1Q9D9P8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Llcfc1Q9D9P8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.57■□□□□ 0.24
Llcfc1Q9D9P8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Llcfc1Q9D9P8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Llcfc1Q9D9P8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Llcfc1Q9D9P8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Llcfc1Q9D9P8 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Llcfc1Q9D9P8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Llcfc1Q9D9P8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Llcfc1Q9D9P8 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.56■□□□□ 0.24
Llcfc1Q9D9P8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Llcfc1Q9D9P8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.56■□□□□ 0.24
Llcfc1Q9D9P8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Llcfc1Q9D9P8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Llcfc1Q9D9P8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Llcfc1Q9D9P8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Llcfc1Q9D9P8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Llcfc1Q9D9P8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Llcfc1Q9D9P8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.56■□□□□ 0.24
Llcfc1Q9D9P8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Llcfc1Q9D9P8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Llcfc1Q9D9P8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Llcfc1Q9D9P8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Llcfc1Q9D9P8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Llcfc1Q9D9P8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Llcfc1Q9D9P8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Llcfc1Q9D9P8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Llcfc1Q9D9P8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Llcfc1Q9D9P8 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms