Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3404Q9D506 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3404Q9D506 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3404Q9D506 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3404Q9D506 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3404Q9D506 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3404Q9D506 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Gm3404Q9D506 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.72■□□□□ 0.27
Gm3404Q9D506 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.72■□□□□ 0.27
Gm3404Q9D506 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Gm27459-201ENSMUST00000184860 107 ntBASIC16.72■□□□□ 0.27
Gm3404Q9D506 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Gm9172-201ENSMUST00000212092 954 ntBASIC16.72■□□□□ 0.27
Gm3404Q9D506 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.72■□□□□ 0.27
Gm3404Q9D506 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3404Q9D506 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Gm3404Q9D506 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3404Q9D506 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.71■□□□□ 0.27
Gm3404Q9D506 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3404Q9D506 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3404Q9D506 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3404Q9D506 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Gm3404Q9D506 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.71■□□□□ 0.27
Gm3404Q9D506 Gm4459-201ENSMUST00000118750 468 ntBASIC16.71■□□□□ 0.27
Gm3404Q9D506 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3404Q9D506 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.71■□□□□ 0.27
Gm3404Q9D506 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3404Q9D506 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.71■□□□□ 0.27
Gm3404Q9D506 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3404Q9D506 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3404Q9D506 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3404Q9D506 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3404Q9D506 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3404Q9D506 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3404Q9D506 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3404Q9D506 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3404Q9D506 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3404Q9D506 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3404Q9D506 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Gm3404Q9D506 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3404Q9D506 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3404Q9D506 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3404Q9D506 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3404Q9D506 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3404Q9D506 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Gm3404Q9D506 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3404Q9D506 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3404Q9D506 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3404Q9D506 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3404Q9D506 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3404Q9D506 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3404Q9D506 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.7■□□□□ 0.26
Gm3404Q9D506 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.7■□□□□ 0.26
Gm3404Q9D506 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3404Q9D506 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3404Q9D506 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.7■□□□□ 0.26
Gm3404Q9D506 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3404Q9D506 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3404Q9D506 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.7■□□□□ 0.26
Gm3404Q9D506 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3404Q9D506 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.7■□□□□ 0.26
Gm3404Q9D506 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Gm3404Q9D506 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.69■□□□□ 0.26
Gm3404Q9D506 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3404Q9D506 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3404Q9D506 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3404Q9D506 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3404Q9D506 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.69■□□□□ 0.26
Gm3404Q9D506 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3404Q9D506 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.69■□□□□ 0.26
Gm3404Q9D506 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3404Q9D506 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.69■□□□□ 0.26
Gm3404Q9D506 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.69■□□□□ 0.26
Gm3404Q9D506 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.69■□□□□ 0.26
Gm3404Q9D506 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.69■□□□□ 0.26
Gm3404Q9D506 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms