Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfap53Q9D439 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfap53Q9D439 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfap53Q9D439 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfap53Q9D439 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.29■□□□□ 0.36
Cfap53Q9D439 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.29■□□□□ 0.36
Cfap53Q9D439 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.29■□□□□ 0.36
Cfap53Q9D439 Gm44454-201ENSMUST00000198541 138 ntBASIC17.29■□□□□ 0.36
Cfap53Q9D439 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfap53Q9D439 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfap53Q9D439 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfap53Q9D439 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfap53Q9D439 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfap53Q9D439 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfap53Q9D439 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfap53Q9D439 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfap53Q9D439 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfap53Q9D439 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.29■□□□□ 0.36
Cfap53Q9D439 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfap53Q9D439 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cfap53Q9D439 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cfap53Q9D439 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cfap53Q9D439 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cfap53Q9D439 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cfap53Q9D439 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cfap53Q9D439 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cfap53Q9D439 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cfap53Q9D439 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.28■□□□□ 0.36
Cfap53Q9D439 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cfap53Q9D439 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cfap53Q9D439 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.28■□□□□ 0.36
Cfap53Q9D439 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cfap53Q9D439 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.28■□□□□ 0.36
Cfap53Q9D439 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cfap53Q9D439 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.28■□□□□ 0.36
Cfap53Q9D439 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cfap53Q9D439 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cfap53Q9D439 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cfap53Q9D439 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cfap53Q9D439 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cfap53Q9D439 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cfap53Q9D439 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cfap53Q9D439 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.28■□□□□ 0.36
Cfap53Q9D439 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.27■□□□□ 0.36
Cfap53Q9D439 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cfap53Q9D439 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.27■□□□□ 0.36
Cfap53Q9D439 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cfap53Q9D439 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cfap53Q9D439 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cfap53Q9D439 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cfap53Q9D439 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cfap53Q9D439 Gm6257-201ENSMUST00000163864 910 ntBASIC17.27■□□□□ 0.36
Cfap53Q9D439 Gm27357-201ENSMUST00000183754 135 ntBASIC17.27■□□□□ 0.36
Cfap53Q9D439 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.27■□□□□ 0.36
Cfap53Q9D439 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cfap53Q9D439 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cfap53Q9D439 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cfap53Q9D439 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cfap53Q9D439 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cfap53Q9D439 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cfap53Q9D439 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cfap53Q9D439 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cfap53Q9D439 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cfap53Q9D439 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cfap53Q9D439 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cfap53Q9D439 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cfap53Q9D439 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cfap53Q9D439 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cfap53Q9D439 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap53Q9D439 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap53Q9D439 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap53Q9D439 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap53Q9D439 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.26■□□□□ 0.35
Cfap53Q9D439 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap53Q9D439 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cfap53Q9D439 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.26■□□□□ 0.35
Cfap53Q9D439 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Cfap53Q9D439 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap53Q9D439 Gm25406-201ENSMUST00000157599 105 ntBASIC17.26■□□□□ 0.35
Cfap53Q9D439 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cfap53Q9D439 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap53Q9D439 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap53Q9D439 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap53Q9D439 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.26■□□□□ 0.35
Cfap53Q9D439 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap53Q9D439 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Cfap53Q9D439 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap53Q9D439 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap53Q9D439 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap53Q9D439 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cfap53Q9D439 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap53Q9D439 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap53Q9D439 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap53Q9D439 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap53Q9D439 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.25■□□□□ 0.35
Cfap53Q9D439 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap53Q9D439 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.25■□□□□ 0.35
Cfap53Q9D439 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap53Q9D439 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.25■□□□□ 0.35
Cfap53Q9D439 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms