Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stag1Q9D3E6 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stag1Q9D3E6 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stag1Q9D3E6 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stag1Q9D3E6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Stag1Q9D3E6 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.72■□□□□ 0.59
Stag1Q9D3E6 Gm9682-201ENSMUST00000197505 556 ntBASIC18.72■□□□□ 0.59
Stag1Q9D3E6 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Stag1Q9D3E6 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stag1Q9D3E6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stag1Q9D3E6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Stag1Q9D3E6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stag1Q9D3E6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stag1Q9D3E6 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stag1Q9D3E6 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.71■□□□□ 0.59
Stag1Q9D3E6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stag1Q9D3E6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Stag1Q9D3E6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stag1Q9D3E6 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Stag1Q9D3E6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stag1Q9D3E6 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stag1Q9D3E6 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.71■□□□□ 0.59
Stag1Q9D3E6 Gm18489-201ENSMUST00000172565 551 ntBASIC18.71■□□□□ 0.59
Stag1Q9D3E6 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Stag1Q9D3E6 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Stag1Q9D3E6 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.71■□□□□ 0.59
Stag1Q9D3E6 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Stag1Q9D3E6 Gm7787-201ENSMUST00000216858 688 ntBASIC18.71■□□□□ 0.59
Stag1Q9D3E6 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.71■□□□□ 0.59
Stag1Q9D3E6 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stag1Q9D3E6 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stag1Q9D3E6 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
Stag1Q9D3E6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stag1Q9D3E6 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stag1Q9D3E6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stag1Q9D3E6 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Stag1Q9D3E6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Stag1Q9D3E6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Stag1Q9D3E6 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.7■□□□□ 0.58
Stag1Q9D3E6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stag1Q9D3E6 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Stag1Q9D3E6 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Stag1Q9D3E6 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.7■□□□□ 0.58
Stag1Q9D3E6 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Stag1Q9D3E6 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stag1Q9D3E6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stag1Q9D3E6 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Stag1Q9D3E6 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Stag1Q9D3E6 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stag1Q9D3E6 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.7■□□□□ 0.58
Stag1Q9D3E6 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stag1Q9D3E6 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stag1Q9D3E6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stag1Q9D3E6 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.7■□□□□ 0.58
Stag1Q9D3E6 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stag1Q9D3E6 Grk6-207ENSMUST00000225925 2769 ntBASIC18.7■□□□□ 0.58
Stag1Q9D3E6 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Stag1Q9D3E6 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.69■□□□□ 0.58
Stag1Q9D3E6 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stag1Q9D3E6 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.69■□□□□ 0.58
Stag1Q9D3E6 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stag1Q9D3E6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stag1Q9D3E6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
Stag1Q9D3E6 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Stag1Q9D3E6 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.69■□□□□ 0.58
Stag1Q9D3E6 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stag1Q9D3E6 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.69■□□□□ 0.58
Stag1Q9D3E6 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stag1Q9D3E6 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.69■□□□□ 0.58
Stag1Q9D3E6 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stag1Q9D3E6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stag1Q9D3E6 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Stag1Q9D3E6 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stag1Q9D3E6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stag1Q9D3E6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stag1Q9D3E6 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.69■□□□□ 0.58
Stag1Q9D3E6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stag1Q9D3E6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stag1Q9D3E6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stag1Q9D3E6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stag1Q9D3E6 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.69■□□□□ 0.58
Stag1Q9D3E6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.68■□□□□ 0.58
Stag1Q9D3E6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stag1Q9D3E6 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stag1Q9D3E6 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stag1Q9D3E6 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stag1Q9D3E6 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stag1Q9D3E6 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stag1Q9D3E6 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Stag1Q9D3E6 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.68■□□□□ 0.58
Stag1Q9D3E6 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Stag1Q9D3E6 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stag1Q9D3E6 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stag1Q9D3E6 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stag1Q9D3E6 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Stag1Q9D3E6 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stag1Q9D3E6 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Stag1Q9D3E6 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stag1Q9D3E6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.68■□□□□ 0.58
Stag1Q9D3E6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms