Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.83■□□□□ 0.28
Mms19Q9D071 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.83■□□□□ 0.28
Mms19Q9D071 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mms19Q9D071 Gm6296-201ENSMUST00000222599 943 ntBASIC16.83■□□□□ 0.28
Mms19Q9D071 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mms19Q9D071 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mms19Q9D071 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mms19Q9D071 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Mms19Q9D071 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mms19Q9D071 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Mms19Q9D071 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Mms19Q9D071 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.83■□□□□ 0.28
Mms19Q9D071 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mms19Q9D071 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mms19Q9D071 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mms19Q9D071 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mms19Q9D071 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.82■□□□□ 0.28
Mms19Q9D071 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mms19Q9D071 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mms19Q9D071 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mms19Q9D071 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Mms19Q9D071 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Mms19Q9D071 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mms19Q9D071 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mms19Q9D071 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mms19Q9D071 Gm11452-201ENSMUST00000122376 690 ntBASIC16.82■□□□□ 0.28
Mms19Q9D071 Gm12497-201ENSMUST00000138778 237 ntBASIC16.82■□□□□ 0.28
Mms19Q9D071 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mms19Q9D071 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mms19Q9D071 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mms19Q9D071 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mms19Q9D071 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mms19Q9D071 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mms19Q9D071 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Mms19Q9D071 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mms19Q9D071 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mms19Q9D071 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mms19Q9D071 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Mms19Q9D071 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mms19Q9D071 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mms19Q9D071 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mms19Q9D071 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mms19Q9D071 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mms19Q9D071 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mms19Q9D071 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mms19Q9D071 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Mms19Q9D071 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mms19Q9D071 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mms19Q9D071 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mms19Q9D071 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mms19Q9D071 Gm44357-201ENSMUST00000195897 142 ntBASIC16.81■□□□□ 0.28
Mms19Q9D071 Gm19658-201ENSMUST00000196231 138 ntBASIC16.81■□□□□ 0.28
Mms19Q9D071 Gm44367-201ENSMUST00000196836 138 ntBASIC16.81■□□□□ 0.28
Mms19Q9D071 Gm44350-201ENSMUST00000197197 138 ntBASIC16.81■□□□□ 0.28
Mms19Q9D071 Gm44390-201ENSMUST00000197533 144 ntBASIC16.81■□□□□ 0.28
Mms19Q9D071 Gm44313-201ENSMUST00000198018 138 ntBASIC16.81■□□□□ 0.28
Mms19Q9D071 Gm44486-201ENSMUST00000198508 138 ntBASIC16.81■□□□□ 0.28
Mms19Q9D071 Gm44314-201ENSMUST00000199263 138 ntBASIC16.81■□□□□ 0.28
Mms19Q9D071 Gm44394-201ENSMUST00000199558 138 ntBASIC16.81■□□□□ 0.28
Mms19Q9D071 Gm44484-201ENSMUST00000199873 138 ntBASIC16.81■□□□□ 0.28
Mms19Q9D071 Gm44466-201ENSMUST00000200264 138 ntBASIC16.81■□□□□ 0.28
Mms19Q9D071 Gm44359-201ENSMUST00000200671 138 ntBASIC16.81■□□□□ 0.28
Mms19Q9D071 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mms19Q9D071 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mms19Q9D071 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.81■□□□□ 0.28
Mms19Q9D071 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mms19Q9D071 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mms19Q9D071 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Mms19Q9D071 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mms19Q9D071 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mms19Q9D071 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mms19Q9D071 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mms19Q9D071 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mms19Q9D071 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Mms19Q9D071 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mms19Q9D071 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.8■□□□□ 0.28
Mms19Q9D071 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mms19Q9D071 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mms19Q9D071 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.8■□□□□ 0.28
Mms19Q9D071 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mms19Q9D071 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Mms19Q9D071 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mms19Q9D071 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mms19Q9D071 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mms19Q9D071 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mms19Q9D071 Gm4459-201ENSMUST00000118750 468 ntBASIC16.8■□□□□ 0.28
Mms19Q9D071 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.8■□□□□ 0.28
Mms19Q9D071 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.8■□□□□ 0.28
Mms19Q9D071 Gm6376-201ENSMUST00000209407 580 ntBASIC16.8■□□□□ 0.28
Mms19Q9D071 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mms19Q9D071 Mzt1-203ENSMUST00000227948 952 ntBASIC16.8■□□□□ 0.28
Mms19Q9D071 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mms19Q9D071 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mms19Q9D071 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mms19Q9D071 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mms19Q9D071 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Mms19Q9D071 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mms19Q9D071 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Mms19Q9D071 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Mms19Q9D071 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms