Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.07■□□□□ 0
Shmt2Q9CZN7 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Shmt2Q9CZN7 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shmt2Q9CZN7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.07■□□□□ 0
Shmt2Q9CZN7 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Shmt2Q9CZN7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shmt2Q9CZN7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Shmt2Q9CZN7 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.07■□□□□ 0
Shmt2Q9CZN7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.07■□□□□ 0
Shmt2Q9CZN7 Gm10052-201ENSMUST00000168019 960 ntBASIC15.07■□□□□ 0
Shmt2Q9CZN7 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shmt2Q9CZN7 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.07■□□□□ 0
Shmt2Q9CZN7 Gm21362-201ENSMUST00000194272 928 ntBASIC15.07■□□□□ 0
Shmt2Q9CZN7 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.07■□□□□ 0
Shmt2Q9CZN7 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.07■□□□□ 0
Shmt2Q9CZN7 Gm7729-201ENSMUST00000050143 801 ntBASIC15.07■□□□□ 0
Shmt2Q9CZN7 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Shmt2Q9CZN7 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shmt2Q9CZN7 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.07■□□□□ 0
Shmt2Q9CZN7 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Shmt2Q9CZN7 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.07■□□□□ 0
Shmt2Q9CZN7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Shmt2Q9CZN7 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.07■□□□□ 0
Shmt2Q9CZN7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.07■□□□□ 0
Shmt2Q9CZN7 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Shmt2Q9CZN7 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Shmt2Q9CZN7 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.07■□□□□ 0
Shmt2Q9CZN7 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shmt2Q9CZN7 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.06■□□□□ 0
Shmt2Q9CZN7 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.06■□□□□ 0
Shmt2Q9CZN7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.06■□□□□ 0
Shmt2Q9CZN7 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Shmt2Q9CZN7 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shmt2Q9CZN7 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Shmt2Q9CZN7 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.06■□□□□ 0
Shmt2Q9CZN7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.06■□□□□ 0
Shmt2Q9CZN7 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.06■□□□□ 0
Shmt2Q9CZN7 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.06■□□□□ 0
Shmt2Q9CZN7 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.06■□□□□ 0
Shmt2Q9CZN7 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.06■□□□□ 0
Shmt2Q9CZN7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Shmt2Q9CZN7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shmt2Q9CZN7 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.06■□□□□ 0
Shmt2Q9CZN7 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shmt2Q9CZN7 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.06■□□□□ 0
Shmt2Q9CZN7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.06■□□□□ 0
Shmt2Q9CZN7 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Shmt2Q9CZN7 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shmt2Q9CZN7 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shmt2Q9CZN7 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Shmt2Q9CZN7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shmt2Q9CZN7 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Shmt2Q9CZN7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Shmt2Q9CZN7 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shmt2Q9CZN7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Shmt2Q9CZN7 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Shmt2Q9CZN7 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.05■□□□□ 0
Shmt2Q9CZN7 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.05■□□□□ 0
Shmt2Q9CZN7 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Shmt2Q9CZN7 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
Shmt2Q9CZN7 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.05■□□□□ 0
Shmt2Q9CZN7 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Shmt2Q9CZN7 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.05■□□□□ 0
Shmt2Q9CZN7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Shmt2Q9CZN7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Shmt2Q9CZN7 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shmt2Q9CZN7 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.05■□□□□ -0
Shmt2Q9CZN7 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Shmt2Q9CZN7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.05■□□□□ -0
Shmt2Q9CZN7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.05■□□□□ -0
Shmt2Q9CZN7 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.05■□□□□ -0
Shmt2Q9CZN7 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.05■□□□□ -0
Shmt2Q9CZN7 Gm27742-201ENSMUST00000184667 60 ntBASIC15.05■□□□□ -0
Shmt2Q9CZN7 Gm44430-201ENSMUST00000203376 995 ntBASIC15.05■□□□□ -0
Shmt2Q9CZN7 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shmt2Q9CZN7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shmt2Q9CZN7 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shmt2Q9CZN7 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Shmt2Q9CZN7 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.05■□□□□ -0
Shmt2Q9CZN7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shmt2Q9CZN7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.05■□□□□ -0
Shmt2Q9CZN7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.05■□□□□ -0
Shmt2Q9CZN7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Shmt2Q9CZN7 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Shmt2Q9CZN7 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.05■□□□□ -0
Shmt2Q9CZN7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Shmt2Q9CZN7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Shmt2Q9CZN7 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.04■□□□□ -0
Shmt2Q9CZN7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.04■□□□□ -0
Shmt2Q9CZN7 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt2Q9CZN7 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt2Q9CZN7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt2Q9CZN7 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.04■□□□□ -0
Shmt2Q9CZN7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Shmt2Q9CZN7 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt2Q9CZN7 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Shmt2Q9CZN7 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.04■□□□□ -0
Shmt2Q9CZN7 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt2Q9CZN7 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.04■□□□□ -0
Shmt2Q9CZN7 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms