Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hdhd3Q9CYW4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hdhd3Q9CYW4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hdhd3Q9CYW4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hdhd3Q9CYW4 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hdhd3Q9CYW4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Hdhd3Q9CYW4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hdhd3Q9CYW4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Hdhd3Q9CYW4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Hdhd3Q9CYW4 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hdhd3Q9CYW4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hdhd3Q9CYW4 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.85□□□□□ -0.35
Hdhd3Q9CYW4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hdhd3Q9CYW4 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hdhd3Q9CYW4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hdhd3Q9CYW4 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hdhd3Q9CYW4 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.83□□□□□ -0.35
Hdhd3Q9CYW4 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Hdhd3Q9CYW4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hdhd3Q9CYW4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hdhd3Q9CYW4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.83□□□□□ -0.36
Hdhd3Q9CYW4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hdhd3Q9CYW4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hdhd3Q9CYW4 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Hdhd3Q9CYW4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hdhd3Q9CYW4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hdhd3Q9CYW4 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hdhd3Q9CYW4 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hdhd3Q9CYW4 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hdhd3Q9CYW4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hdhd3Q9CYW4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.83□□□□□ -0.36
Hdhd3Q9CYW4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.83□□□□□ -0.36
Hdhd3Q9CYW4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.83□□□□□ -0.36
Hdhd3Q9CYW4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hdhd3Q9CYW4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Hdhd3Q9CYW4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.83□□□□□ -0.36
Hdhd3Q9CYW4 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hdhd3Q9CYW4 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hdhd3Q9CYW4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hdhd3Q9CYW4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hdhd3Q9CYW4 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hdhd3Q9CYW4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hdhd3Q9CYW4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Hdhd3Q9CYW4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms