Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.84■□□□□ 0.45
Chd1lQ9CXF7 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd1lQ9CXF7 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd1lQ9CXF7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chd1lQ9CXF7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.84■□□□□ 0.45
Chd1lQ9CXF7 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.84■□□□□ 0.45
Chd1lQ9CXF7 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd1lQ9CXF7 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Chd1lQ9CXF7 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Chd1lQ9CXF7 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd1lQ9CXF7 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chd1lQ9CXF7 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Chd1lQ9CXF7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chd1lQ9CXF7 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Chd1lQ9CXF7 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Chd1lQ9CXF7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.83■□□□□ 0.45
Chd1lQ9CXF7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chd1lQ9CXF7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Chd1lQ9CXF7 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chd1lQ9CXF7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chd1lQ9CXF7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
Chd1lQ9CXF7 Gm29707-201ENSMUST00000196325 491 ntBASIC17.83■□□□□ 0.44
Chd1lQ9CXF7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.83■□□□□ 0.44
Chd1lQ9CXF7 Gm7370-201ENSMUST00000219471 767 ntBASIC17.83■□□□□ 0.44
Chd1lQ9CXF7 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chd1lQ9CXF7 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chd1lQ9CXF7 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd1lQ9CXF7 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd1lQ9CXF7 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Chd1lQ9CXF7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd1lQ9CXF7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd1lQ9CXF7 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Chd1lQ9CXF7 Efs-202ENSMUST00000227037 2540 ntBASIC17.82■□□□□ 0.44
Chd1lQ9CXF7 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1lQ9CXF7 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1lQ9CXF7 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1lQ9CXF7 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.82■□□□□ 0.44
Chd1lQ9CXF7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1lQ9CXF7 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1lQ9CXF7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Chd1lQ9CXF7 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1lQ9CXF7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Chd1lQ9CXF7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.82■□□□□ 0.44
Chd1lQ9CXF7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1lQ9CXF7 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.82■□□□□ 0.44
Chd1lQ9CXF7 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1lQ9CXF7 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.82■□□□□ 0.44
Chd1lQ9CXF7 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1lQ9CXF7 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1lQ9CXF7 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Chd1lQ9CXF7 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Chd1lQ9CXF7 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1lQ9CXF7 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1lQ9CXF7 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1lQ9CXF7 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1lQ9CXF7 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Chd1lQ9CXF7 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.81■□□□□ 0.44
Chd1lQ9CXF7 Gm11336-201ENSMUST00000118168 334 ntBASIC17.81■□□□□ 0.44
Chd1lQ9CXF7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1lQ9CXF7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.81■□□□□ 0.44
Chd1lQ9CXF7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.81■□□□□ 0.44
Chd1lQ9CXF7 Odf3b-204ENSMUST00000227834 930 ntBASIC17.81■□□□□ 0.44
Chd1lQ9CXF7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1lQ9CXF7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1lQ9CXF7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Chd1lQ9CXF7 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1lQ9CXF7 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Chd1lQ9CXF7 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1lQ9CXF7 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.81■□□□□ 0.44
Chd1lQ9CXF7 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.81■□□□□ 0.44
Chd1lQ9CXF7 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Chd1lQ9CXF7 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.81■□□□□ 0.44
Chd1lQ9CXF7 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.81■□□□□ 0.44
Chd1lQ9CXF7 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Chd1lQ9CXF7 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
Chd1lQ9CXF7 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1lQ9CXF7 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Gm10566-201ENSMUST00000086739 996 ntBASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms