Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf135Q9CWS1 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rnf135Q9CWS1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Rnf135Q9CWS1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf135Q9CWS1 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf135Q9CWS1 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf135Q9CWS1 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Gm27357-201ENSMUST00000183754 135 ntBASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Gm27742-201ENSMUST00000184667 60 ntBASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf135Q9CWS1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rnf135Q9CWS1 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rnf135Q9CWS1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Rnf135Q9CWS1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf135Q9CWS1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf135Q9CWS1 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf135Q9CWS1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf135Q9CWS1 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf135Q9CWS1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf135Q9CWS1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Rnf135Q9CWS1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf135Q9CWS1 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf135Q9CWS1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Rnf135Q9CWS1 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf135Q9CWS1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf135Q9CWS1 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf135Q9CWS1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.39■□□□□ 0.21
Rnf135Q9CWS1 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf135Q9CWS1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf135Q9CWS1 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf135Q9CWS1 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.39■□□□□ 0.21
Rnf135Q9CWS1 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf135Q9CWS1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Rnf135Q9CWS1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf135Q9CWS1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf135Q9CWS1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf135Q9CWS1 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.38■□□□□ 0.21
Rnf135Q9CWS1 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf135Q9CWS1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.38■□□□□ 0.21
Rnf135Q9CWS1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Rnf135Q9CWS1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf135Q9CWS1 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf135Q9CWS1 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf135Q9CWS1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf135Q9CWS1 Gm44771-201ENSMUST00000206975 626 ntBASIC16.38■□□□□ 0.21
Rnf135Q9CWS1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.38■□□□□ 0.21
Rnf135Q9CWS1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf135Q9CWS1 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf135Q9CWS1 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.38■□□□□ 0.21
Rnf135Q9CWS1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf135Q9CWS1 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Rnf135Q9CWS1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf135Q9CWS1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Rnf135Q9CWS1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rnf135Q9CWS1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf135Q9CWS1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf135Q9CWS1 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf135Q9CWS1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rnf135Q9CWS1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf135Q9CWS1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf135Q9CWS1 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Rnf135Q9CWS1 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf135Q9CWS1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf135Q9CWS1 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf135Q9CWS1 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf135Q9CWS1 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf135Q9CWS1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf135Q9CWS1 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf135Q9CWS1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf135Q9CWS1 Gm45328-201ENSMUST00000210942 917 ntBASIC16.37■□□□□ 0.21
Rnf135Q9CWS1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf135Q9CWS1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf135Q9CWS1 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf135Q9CWS1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf135Q9CWS1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf135Q9CWS1 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms