Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc3Q9CW03 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc3Q9CW03 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc3Q9CW03 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc3Q9CW03 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc3Q9CW03 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smc3Q9CW03 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smc3Q9CW03 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc3Q9CW03 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc3Q9CW03 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Smc3Q9CW03 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.52■□□□□ 0.56
Smc3Q9CW03 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Smc3Q9CW03 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Smc3Q9CW03 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.52■□□□□ 0.56
Smc3Q9CW03 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc3Q9CW03 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc3Q9CW03 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc3Q9CW03 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc3Q9CW03 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Smc3Q9CW03 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc3Q9CW03 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc3Q9CW03 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc3Q9CW03 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc3Q9CW03 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smc3Q9CW03 Gm6623-201ENSMUST00000173570 544 ntBASIC18.52■□□□□ 0.56
Smc3Q9CW03 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.52■□□□□ 0.56
Smc3Q9CW03 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.52■□□□□ 0.56
Smc3Q9CW03 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smc3Q9CW03 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc3Q9CW03 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Smc3Q9CW03 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Smc3Q9CW03 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc3Q9CW03 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc3Q9CW03 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc3Q9CW03 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Smc3Q9CW03 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Smc3Q9CW03 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smc3Q9CW03 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smc3Q9CW03 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smc3Q9CW03 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smc3Q9CW03 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.52■□□□□ 0.55
Smc3Q9CW03 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc3Q9CW03 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc3Q9CW03 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Smc3Q9CW03 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc3Q9CW03 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.51■□□□□ 0.55
Smc3Q9CW03 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smc3Q9CW03 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc3Q9CW03 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc3Q9CW03 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Smc3Q9CW03 Gm9013-201ENSMUST00000132939 882 ntBASIC18.51■□□□□ 0.55
Smc3Q9CW03 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.51■□□□□ 0.55
Smc3Q9CW03 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc3Q9CW03 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.51■□□□□ 0.55
Smc3Q9CW03 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Smc3Q9CW03 Gm9987-201ENSMUST00000069768 567 ntBASIC18.51■□□□□ 0.55
Smc3Q9CW03 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Smc3Q9CW03 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Smc3Q9CW03 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc3Q9CW03 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc3Q9CW03 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc3Q9CW03 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc3Q9CW03 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc3Q9CW03 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.51■□□□□ 0.55
Smc3Q9CW03 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc3Q9CW03 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc3Q9CW03 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc3Q9CW03 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smc3Q9CW03 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Smc3Q9CW03 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc3Q9CW03 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc3Q9CW03 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Smc3Q9CW03 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Smc3Q9CW03 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Smc3Q9CW03 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smc3Q9CW03 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc3Q9CW03 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smc3Q9CW03 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc3Q9CW03 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc3Q9CW03 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.5■□□□□ 0.55
Smc3Q9CW03 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Smc3Q9CW03 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smc3Q9CW03 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.5■□□□□ 0.55
Smc3Q9CW03 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc3Q9CW03 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc3Q9CW03 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc3Q9CW03 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc3Q9CW03 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc3Q9CW03 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc3Q9CW03 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Smc3Q9CW03 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc3Q9CW03 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc3Q9CW03 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms